Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01257
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Entry
RBI_I01257 CDS
T03158
Name
(GenBank) hypothetical protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RBI_I01257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rus02000
]
RBI_I01257
Transporters [BR:
rus02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
RBI_I01257
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
Glyco_hydro_30C
Motif
Other DBs
NCBI-ProteinID:
CCO04969
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All DBs
Position
I:1398875..1400443
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AA seq
522 aa
AA seq
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MGKKEYLACLISLVMLGLTACSDNANKTGSEVSSGTSSAEEKDYGYGFDKFGFSRFDVET
AESLTYENKTKIVYLTNYDTTFTTTDDDPRIYDEIYIENTVNEYLDKNGYDFYVDFVMNG
EFDFKTGELYPNMDVYESMLKNNEQVDIVNTGLGMSALGGYGDTFNLFVERGYLEPLNDY
FQTDSGKAFYDGFDGIVWKQTTCADGMIYGKTTDYTLAQPLVLLLNGDVCNEYGVNTDDI
QSLEDLEPYLQSLADEGKRGLLLDSTCELYYEMAGFCRYKGVYINAETGLAENIFENEKA
LKYLKTVYEYSQNGYISNNVDIANDAYICSLSPAMPLYYDSSKIVSSGYLQQEELNGVVG
ISSSSKNKETAFELLALLNTDEELANIIYNGAEGRNYAVKDGEKYPNKNALPFYDVAATM
TNSIIAESNSQDNQSKREDIAICWEHSEVSPFYGLEVSDDLAEKLEKTAAVYDDFYGLFY
GDYGEYQSLDEALFAANEQLKAAGIDEVLNELNEQHGKFDKE
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaaagaatatttagcctgcctgatctcgctggtcatgctcggtctaacagcg
tgctccgataatgcaaacaagaccggctcggaagtaagctcaggtacttcatcagccgaa
gaaaaggattacggttacggctttgacaagttcggattttcgcgttttgacgttgaaacg
gcagaatccctcacttatgaaaataaaacaaagatcgtatatcttacaaactacgatacg
acctttacaactactgacgacgacccgagaatatacgatgaaatttacattgaaaacact
gtgaacgagtatctggataaaaacggatatgacttttacgttgattttgtaatgaacggc
gagtttgatttcaaaacgggcgagctgtacccaaacatggacgtttacgaaagtatgctc
aaaaataacgagcaggtcgatatagtcaacacggggctgggcatgagcgcgctgggcggt
tacggagatacctttaatctgtttgtagaaaggggttatctagaacctttgaacgattat
tttcagaccgacagcggaaaagcgttttacgacgggttcgacggcatagtctggaagcag
acgacctgtgccgacggtatgatatacggaaaaaccaccgactatacgcttgctcagccg
ctggtattgttgcttaacggcgatgtttgcaacgaatacggggtaaatacagacgatatc
caaagcctagaagatctcgagccgtatctgcaaagccttgcggacgaggggaaacgtggt
ctgctgctcgacagcacctgcgaactgtattatgagatggcgggattttgcagatacaag
ggcgtgtatatcaacgccgaaacgggactggcggaaaatattttcgagaatgaaaaagcc
ttgaaatatctcaagaccgtatatgaatattcgcaaaatggatatatatcaaacaacgtc
gatattgcgaacgacgcttatatttgcagcctgtcgccggcaatgccgctttattatgat
tcgtcgaaaatcgtttcaagcggatatttgcagcaggaggaactgaacggagtcgtgggg
atatcgtcctctagcaagaacaaggaaacggcgtttgaactgctcgctctgctgaacacg
gacgaagagcttgcgaacataatttacaacggcgcagagggacgaaattatgcggtcaag
gacggcgaaaagtacccgaacaagaacgctctgccgttttacgacgtcgccgcgacaatg
actaattccattatcgccgaaagcaattcgcaggacaatcaaagcaagcgggaggatatt
gcgatatgctgggagcattccgaggtatctccgttttacggtttggaggtatccgacgat
cttgccgaaaaattggagaaaacggcggcggtctatgacgatttttacggtctgttctac
ggcgattacggcgaatatcaaagccttgacgaagccttgttcgcagcaaatgaacagctg
aaagccgcaggaatagacgaggttttaaacgagctgaacgagcagcatggaaaatttgat
aaagaataa
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