Ruegeria sp. THAF33: FIU92_05080
Help
Entry
FIU92_05080 CDS
T06269
Symbol
xylF
Name
(GenBank) D-xylose-binding periplasmic protein precursor
KO
K10543
D-xylose transport system substrate-binding protein
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU92_05080 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rut02000
]
FIU92_05080 (xylF)
Transporters [BR:
rut02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
FIU92_05080 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DHQS
ABC_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QFT72393
UniProt:
A0A5P9GEU9
LinkDB
All DBs
Position
994767..995786
Genome browser
AA seq
339 aa
AA seq
DB search
MKRILSASVVAVLMGTAAFAEPTVGVSWSNFQEERWKTDEAAIKAALEAGGAEYISSDAQ
SSSAKQLSDIESLIAQGVDALIILAQDSQAIGPAVQAAADEGIPVIAYDRLIEDDRAFYL
TFDNVEVGRMQARAVFEAMPKGNYVMIKGSPTDPNADFLRGGQQEIIQAAVDSGDIVIVG
EAYTDGWLPANAQRNMEQILTANENNVDAVVASNDGTAGGVVAALTAQGMEGIPVSGQDG
DHAALNRVAKGTQTVSVWKDARELGKAAGEIAVALSNGTSPEDIEGAIKWTSPGGTEMNS
VFLAPVPITKDNLSVVVDAGWIPLEDLCQGVENGPAPCN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaattctcagcgcctctgtcgtggcggtcctgatggggacagccgcattcgca
gagcccacggtcggcgtaagctggtcgaatttccaggaagagcgttggaagaccgacgaa
gcggcgatcaaggccgcactggaagcgggcggtgcggaatacatctcgtcggatgcccaa
tcttcttctgccaagcaattgtcggatattgaaagtctgattgcccagggcgtcgatgcg
ctgatcattctggcgcaggattcccaggccatcggcccggcagtgcaggcggcggcagac
gaaggcattccggtcatcgcgtatgaccgtctgatcgaagatgaccgtgccttctatctg
acattcgataacgttgaagtcggccgcatgcaggcccgcgcggtgttcgaagcgatgccg
aaaggcaactatgtgatgatcaagggctcgcccacggatccgaacgcggatttcctgcgc
ggcggtcagcaagagatcatccaggccgccgttgacagcggcgatatcgtcatcgtgggt
gaagcttataccgacggttggctgccggcgaacgcacagcgcaacatggagcaaatcctt
accgcgaacgaaaacaacgttgatgccgtcgtggcctcgaatgacggtactgccggcggc
gttgttgcagcactgaccgcgcagggcatggaaggcattccggtctcgggtcaggatggc
gatcacgcggcgctgaaccgggttgccaagggtacgcagaccgtttctgtctggaaagat
gcgcgtgaactgggcaaagctgccggtgaaattgcagttgcgttgagcaatggaacaagc
cccgaggacattgaaggtgccatcaaatggacttcgcctggcggaaccgagatgaactcg
gtcttccttgcgcctgtaccgatcaccaaagacaacctgtccgtcgtggtcgatgctggc
tggattccgttggaagacctgtgccagggcgtcgaaaacggccctgcaccctgtaactaa
DBGET
integrated database retrieval system
