Rhodomicrobium vannielii: Rvan_0815
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Entry
Rvan_0815 CDS
T01353
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rvan_0815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rva03400
]
Rvan_0815
Enzymes [BR:
rva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rvan_0815
DNA repair and recombination proteins [BR:
rva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rvan_0815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecG_wedge
RecG_dom3_C
tRNA_anti-codon
SecA_DEAD
Flavi_DEAD
AAA_16
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADP70091
UniProt:
E3I178
LinkDB
All DBs
Position
complement(902748..904967)
Genome browser
AA seq
739 aa
AA seq
DB search
MSESQSQMALFEAPVPWQGASKPTFLERMASPDKDRPEKGADAAALQAPLTSLKGLGPRG
AELLTKLLAKPLTPPRVIDLLWHLPTGTLDRRLTPSVSEALPGGIVTLVVTPVKHSAPPR
SAPRAPVRIVCEDESGALDIVYFHGDRAGIKRLLPLGEPRLVSGRVERHGTRLQMTHPDY
VLAPNERHRLPAIEPVYPLTLGLTQKFLYRVIGDALARVPEFPEWLDASLVEAQGWPGFR
DALVTLHRPQSHADLALWHKARERLAYDEVSSAQLAIALVRRSHRQLAGRSLVGEGSLAA
KMRASLPFALTRSQETALAEIKADMASSRRMLRLLQGDVGAGKTVVAALAMANAVEAGAQ
VALMAPTDVLARQHLETLTPLCEAAGIPLGYLSGREQGRTRGRLLGKLASGEIRAICGTH
ALFQPDVVFRDFGLAIVDEQHRFGVAQRLALQEKARAGDADILVMTATPIPRTLQLSLHG
DLDVSQLTEKPAGRKPVITRTVPQERLEDVIEGLHRALGEGAQVYWVCPAVESETARDMT
AVTERAAHLRQVFGERVGLVHGKLPGAEKDAAIAAFIARETTILVATTVIEVGVNVPNAT
VMIIENAEMFGLAQLHQLRGRVGRGAAQSSCILLYKGPLSETAKSRLDILRQVDDGFVIA
EEDLRLRGGGEVLGAKQSGDPGFRIAGWPEAAPLIERAATAVRYLLGRDPYLKSDQGLAA
RTCLALFERDEAMRLLQAG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcgcagtcgcaaatggcgttgttcgaagcgccggttccttggcagggcgct
agcaagcccacatttctggaacgcatggcttccccggacaaagaccgccccgaaaaaggc
gccgatgctgccgcgcttcaggcgccgctgacgagcctcaagggcctcggtccgcgcggc
gcggagcttctgacgaagctgctcgcgaagccgctgacgccgccgcgcgtgatcgatctc
ctgtggcacctgccgacgggcacgctcgaccgcaggctcacgccatccgtcagcgaagcg
ctgccgggcggcatcgtcacgctcgtcgtgacgccggtgaagcacagcgcgccgccgcgc
tcggcaccgcgcgcgccggtgcgcatcgtgtgcgaggacgaaagcggcgcgctcgacatc
gtctacttccacggcgaccgcgcggggatcaagcgcctgctgccgctgggcgagccgcgc
ctcgtttccggccgcgtcgagcgccacggcacgcgcttgcagatgacgcaccccgattat
gtgctcgcgccgaacgagcgccatcgcctgcccgccatcgagccggtctatcccctgacg
ctcggccttacgcagaaatttctctatcgcgtcatcggcgacgccctcgcgagagtgccc
gaattccccgaatggctcgatgcatcgctcgtcgaagcgcagggctggccgggtttccgt
gacgcgctcgtgacgctgcaccgcccgcaaagccacgccgacctcgcgctgtggcacaag
gcgcgtgagcggctcgcctatgacgaagtgtcgagcgcgcagctcgccatcgcgctggtg
cggcgcagtcaccgccagcttgccgggcgctcgctcgtcggcgaaggcagtctcgccgcg
aagatgcgcgcatccctgcccttcgcgctgacgcgttcgcaagagacggcgctcgccgag
atcaaggccgacatggcgtcgtcgcggcgcatgctgcggctgcttcagggcgacgtcggc
gcgggcaagaccgtcgttgcggcgctggccatggcgaacgccgtcgaggcgggcgcgcag
gtcgcgctcatggctccgaccgacgttctggcccgccagcacctcgaaacgctgacgccg
ctctgcgaggcggctggcatcccgctcggctatctctcggggcgcgaacagggccgcacg
cgcgggcggcttctcggcaagctcgcgagcggcgaaattcgcgcgatctgcggcacccac
gccctgtttcagccggatgtggttttccgcgatttcggcctcgccatcgtggacgagcag
catcgcttcggcgtagcgcagcgcctcgccttgcaggagaaggcgcgcgcgggcgatgcc
gacatcctcgtcatgaccgcgacgccgatccctcgcacgctgcaactgtcgctgcacggc
gacctcgacgtgtcgcaactcaccgagaagcccgcggggcgcaagcccgtcatcacccgc
accgtgccgcaggagcggcttgaggatgtgatcgaggggttgcatcgcgcgctcggcgaa
ggcgcgcaggtctattgggtgtgccccgccgtcgaaagcgagaccgcgcgcgacatgacc
gccgtgactgagcgcgccgcgcatctgcgccaggtgttcggcgagcgggtcggccttgtg
catggcaagcttcccggcgcggagaaagacgcggcgattgccgccttcatcgcgcgcgaa
accacgatccttgtcgccaccaccgtcatcgaagttggcgtgaacgtgccgaacgcgacc
gtgatgattatcgagaacgcggagatgttcggcctcgcgcaacttcaccaactacgcgga
cgcgtcgggcgcggcgcggcgcagtcgtcatgcatcctgctctacaaggggccgctgtct
gaaacggcgaaatcgcggctcgacatcttgcggcaggtggacgacggcttcgtgatcgcg
gaggaggatttgcgacttcgcggcggcggcgaggttctgggcgcgaagcagagcggcgat
ccgggcttccgcatcgcgggctggcccgaggcagcgccgctcatcgagcgcgccgcgacc
gccgtccgctatctgctcggccgcgatccttacctcaaatcggaccagggattggccgcg
cgcacctgcctcgctctgttcgagcgcgacgaggcaatgcggctgttgcaggcgggatag
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