Rhodomicrobium vannielii: Rvan_3416
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Entry
Rvan_3416 CDS
T01353
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00250
Alanine, aspartate and glutamate metabolism
rva00410
beta-Alanine metabolism
rva00430
Taurine and hypotaurine metabolism
rva00650
Butanoate metabolism
rva01100
Metabolic pathways
rva01110
Biosynthesis of secondary metabolites
rva01120
Microbial metabolism in diverse environments
rva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rvan_3416
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Rvan_3416
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Rvan_3416
00430 Taurine and hypotaurine metabolism
Rvan_3416
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rvan_3416
Enzymes [BR:
rva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Rvan_3416
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ADP72598
UniProt:
E3I3F0
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All DBs
Position
3723417..3724967
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AA seq
516 aa
AA seq
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MASEKLTEISQHPSPSEDAGADVADYLLGSDLSKLRGWVEARSASFLRSADAGERSPIRR
VREKFRSCEVPDTAMALDDYLSLLDQDVLPHCSSLASPRYLGHMTSPIPGFLPELGRLVQ
TLNQNVVKMETSGSLTFVERQVLGMLHKETYGFDTAFYDRRVQDRDSTLGLFASGGTIAN
LTALRAAKQRASVHAGGGARMAVIGSELMHYSFAKGADLMGLELRRVPVDEQNRMLPAAL
EREIEACEAEGVTVAALIAIAGTTEFGSVDPLASICRLGQARNIHVHVDAAWGGGFLLSP
RNRHILAGIELADTVTIDGHKQLMVPLGCGMLFFRDPEVSKTIMHHAPYAVRPNSEDQGR
FTLEGTRPATAIYVHAALHLIGKSVYDALFSASLERTRIMARHIEGMPEFELTSRPDMNI
LTYRYIPEAMRGTTPGPADNHRISRFNVALQRAQRDKGDSFVSRTFRPVSRHGDEPLALL
RAVLLNPRTTEDDILFLLRDQVGIARELENSPAFHE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagaaaagctcaccgaaatctcgcagcacccctctccgagcgaggatgcgggt
gcagacgtcgccgattatctgctcgggtctgacctgtcgaagctgcgcggttgggtcgaa
gcgagatcggcctcattcctgaggagcgctgatgccggggagcggtcgccgatccggcgc
gttcgggaaaaatttcgatcctgcgaggtgcccgacaccgccatggcgttggacgattat
ctgtcgttgctcgatcaggatgttctgccgcattgctcgtcgttggcctcgccgcgctac
ctcggacacatgacatcgcccattcccggcttcctgccggagctggggcgtctggtgcag
accctaaaccagaacgtcgtgaagatggaaaccagcggcagcctgacgttcgtggagcgt
caggttctcgggatgctgcacaaggaaacctacggtttcgacactgcgttctatgaccgc
cgcgtgcaagatcgcgattcgacgttgggcctcttcgcgagcggcggcaccatcgccaat
ctgaccgcgcttcgggcggccaagcagcgggcgagcgtacacgcaggcggcggcgcccgc
atggccgtgattggctcggagttgatgcactattccttcgccaagggtgcggacctgatg
gggctggaactgcgcagggtgcccgtcgacgagcagaaccgcatgcttcccgcggcgctt
gagcgggagatcgaagcttgcgaggcggagggcgtcacggtcgccgcgctcattgccatc
gccggaacgacggagttcggaagcgtcgatccgctggcttcgatctgccgtctcgggcag
gcgcgtaatattcatgtccatgtcgatgcagcgtggggcggcggctttctgctcagtccg
cgcaatcgccatatcctcgccgggatcgagttggcggacacggtcaccatcgacggacac
aagcagctcatggtcccgcttggatgcgggatgctgttcttccgcgacccggaagtgtcg
aaaaccatcatgcatcacgcgccctatgcggtgcggcccaactccgaagatcaggggcgt
ttcacgctcgaaggcacgcgccccgcaacggcgatctatgtccacgccgctctgcacctg
atcggaaaatccgtctacgatgcactcttctccgccagccttgagcggacacggatcatg
gcgcgccatatcgaggggatgccggagttcgaactgacctcccgccctgacatgaacatc
ctgacctatcgctacattcccgaggcgatgcggggcaccacaccggggcctgccgacaat
caccggatcagccgcttcaacgtcgcgttgcagcgcgcgcagcgcgacaagggcgacagc
ttcgtatcgcggacgtttcggcctgtgtcgcgacatggcgatgagccgctcgcgcttctc
agggccgtcctgctcaatccgcgcaccacggaagacgacatcctcttcctcctgcgcgat
caggtcgggatcgcccgggaactggaaaactccccggcgtttcatgaatga
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