Rahnella victoriana: J9880_18245
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Entry
J9880_18245 CDS
T07871
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00230
Purine metabolism
rvc01100
Metabolic pathways
rvc01120
Microbial metabolism in diverse environments
rvc01232
Nucleotide metabolism
Module
rvc_M00958
Adenine ribonucleotide degradation, AMP => Urate
rvc_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
J9880_18245 (xdhB)
Enzymes [BR:
rvc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
J9880_18245 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
UHM90218
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Position
3952479..3954878
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AA seq
799 aa
AA seq
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MSESKPLLSQAEMEARFRAGLQSGVGKSQKHESADKHVSGEAVYVDDRLEFPNQLHLVPL
LSPHAHADIVSIDTEPCYGVPGVVRVMTAGDVPGNPDIAPLTHGDPLMAQGTVQYVGQIV
LVVAATSMEAARAAVALAKVEYQPRDAVLTVKQALALEHYVEEPHQHKRGDAEMALACAP
HRLQGELEIGGQEHFYLETQIASVMPGEDGAMLVYSSTQHPTEVQKLVASVLGVPMHKVV
VDMRRMGGGFGGKETQAAGTACLAALAAHLTGRPAKMRLARQDDMLITGKRHPFHVSYDV
GFTDEGIIHGIDIKLAANCGYSLDLSGSIVDRAMFHSDNAYYLGDALITGYRCKTNMASN
TAYRGFGGPQGIVAIEHIVDHIARELGLDPLTVRKNNYYGQESRNVTHYHQPVGQNLLQE
MTQQLEDSAEYTARRDAVTEFNHRNRYLKKGLALTPVKFGISFTASFLNQAGALVLVYTD
GSIQLNHGGTEMGQGLNTKVAQVVAEVFQVDISAIQITATDTGKVPNTSPTAASSGADLN
GKAAQNAAEIIKGRMVEMLMRQHDAQEKDIVFSNSQVRVKEQYFSFGQIATQCWLNQVPL
SSTGYYKTPKIFYDRSKAAGHPFYYFSYGAACAEVLVDTLTGEYKLLRADILHDVGDSLN
PAIDIGQVEGGFVQGMGWLTTEELVWNDKGRLMTSGPAAYKIPAIGDIPQDLRVRLVENR
KNPEDTVFHSKAVGEPPFMLGISVWCAIKDAVASLANYRVHPHIDAPATPERVLNGVNQL
RFTGDVVTFDAALNSNVTG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatccaaacccttactttctcaggctgagatggaagcccgttttcgcgcaggt
ctgcagagcggcgtcggcaaaagccagaaacacgaaagcgcggataaacatgtcagcggc
gaggcggtgtatgtcgacgaccggctggaattccccaatcagttgcatcttgtgccgctg
ctcagtccgcacgctcacgcggatattgtgtccatcgataccgaaccttgttatggcgta
ccgggcgtggtgcgggtaatgactgccggcgatgtgccgggcaatccggacatcgcgcca
ctgactcacggtgatccgctgatggcgcagggcacggtgcagtatgttggccagattgtg
ctggtggttgccgcaacgtcaatggaagccgcacgcgcagcggtggccctggcgaaagtg
gagtatcagccacgcgacgcggtactgacggtcaaacaggcgctggcgctggaacattac
gtggaagaaccgcaccagcataaacggggtgacgccgaaatggcgctggcctgtgcgccg
caccgtttgcagggtgaactggaaattggcggtcaggagcatttttatctcgaaacgcag
attgcttccgtcatgccgggtgaagatggcgcgatgctggtgtacagctcgacgcaacat
ccgacagaagtgcaaaagctggtcgcgtcggtactgggtgtgccgatgcataaagtggtg
gttgatatgcgccgcatgggcgggggatttggtggcaaagaaacacaggcggcaggcacc
gcatgtctggcggccctggcggcgcacctcaccggacgccccgcgaaaatgcgtctggcc
cgtcaggatgacatgctgatcaccggcaagcgccatccttttcacgtcagttatgacgtc
ggctttaccgatgagggcatcattcatgggatcgatatcaaactggcggccaactgcggt
tattcgctggatctgtccggatctatcgtcgatcgtgccatgttccattctgataatgcc
tattacctcggtgatgcgctgattaccggttatcgctgtaaaaccaatatggcctcgaat
acggcgtaccgcggatttggcggcccgcaggggatagtggcgattgagcacattgtcgat
cacatcgcccgcgaactggggctggatccgctgacagtgcgtaaaaacaattactacggt
caggaaagccgcaacgttacgcattatcaccagccggtggggcaaaatctgttgcaggaa
atgactcagcaactggaagacagcgcggaatacaccgcaagacgtgacgctgtcacagag
tttaaccaccgcaaccgttatctgaaaaagggtctggcgctgacgccggtaaaattcggc
atctccttcaccgccagtttcctcaatcaggcgggcgctctggtgctggtgtataccgac
ggcagtattcagcttaatcacggcggcaccgagatgggacaggggctgaataccaaagtg
gcgcaggtggtggcggaagtgtttcaggttgatatcagcgctattcagatcaccgcgacc
gataccggcaaagtgcctaacacctcgccgaccgcagcctcctccggtgcggatcttaac
gggaaagccgcacaaaacgcggccgaaatcattaaagggcgcatggttgagatgctgatg
cgacagcatgatgcgcaggaaaaggacattgtgttcagcaacagtcaggtgcgggttaaa
gagcaatatttcagtttcgggcagatcgctacccagtgctggctgaatcaggtgccgctt
tccagcaccggttattacaaaacgccgaagattttctatgaccgcagcaaagcagccggg
catccattctactacttctcctacggcgcggcctgcgcggaagtgctggtcgatacgctg
accggcgaatacaagttgctgcgtgcggatattctgcatgacgtcggcgactcgctgaat
ccggcgattgatattggtcaggttgaaggcggtttcgtgcagggcatgggctggctgacc
accgaagaactggtatggaacgacaaaggacgcctgatgaccagcggtccggcggcgtat
aagatcccggcgattggcgatattccgcaggatttacgtgtcaggctggtggagaaccgc
aaaaacccggaagacaccgttttccattccaaggccgtgggcgagccgccttttatgctg
gggatttcggtctggtgcgcgatcaaagatgcggtcgccagtctggcaaattaccgcgtt
catccgcatatcgatgcgcctgccacgccggaaagggtgctgaatggggtgaatcagtta
cgtttcacaggtgacgttgtcacttttgatgctgcgctaaacagcaatgtcacgggctaa
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