Rhododendron vialii: 131298053
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Entry
131298053 CDS
T09330
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
rvl
Rhododendron vialii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
131298053
NCBI-ProteinID:
XP_058179311
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All DBs
Position
8a:complement(8299487..8313462)
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AA seq
1425 aa
AA seq
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MTSSLSSAIRQQQQPSMSTSQTVTLDSSTLFLTSHTTLSLQSPPLSFSLLSTHSPLPPLP
SDFPQSKLIPRTRFIVDGFRSSGDHSVSYFLSHFHSDHYAGLNANWSKGIIFCSHTTARL
LIEVLKISSLFVVPLSLSEPVLIDGCEASLIDANHCPGAVQFLFRIPGSGGGKSETYVHT
GDFRYCDSMKLELGLTEFVGCDAVFLDTTYCDPKFLFPSQEESIEYIVSMIERFGVENEG
SVKSVLFLVATYVIGKERILLEIARRCKRKILVDSRKLAILRVLGLRKDDAFTEEESESD
VHVVGWNVLGETWPYFRPNFVKVKEIMNERGYSKVVGFVPTGWTYEVKRNKFAVRTKDEF
EIHLVPYSEHSNYDELREYVRFLKPKRVIPTVGADVEKLDSKHADSMRKHFAGLVDEMAI
KQEFLMGFHRCTQGTDGMVEKDSTIGQNKMDQFKEVQSPQFKPQDENDQRIVLDSLPFGR
EPVAQDIALLSDSEKEELIQQLRDCLPTWVTELQMIDLLSSSGGNIVDAVSNFYERELEF
HNQIIPCASADCTLQTSPLNKSVSPAKPCFVNNPLGNVVASLDKKLKSPSTRNLTKSSNS
TGKKRRNVDNKPNKKARSNSSLESTTQKQSTITSFFTKRGPCVSQCSGVETLLEESPNDK
NMMPSDPIKSYKEELDQFIQIIHGSESLRSYAADILEETKGDINMALDKYYSNPPEPYLC
ENENRLVDVGRSVRDGPSHSNCSSHMEKVPSDSEALENMENLSVPILSPENAATTPVSLP
AEQYSPVEHACWRHGKPAPYIHLARTFDLVEGEKGKIKATSMLCNMFRSLLALSPEDVLP
AVYLCTNKIAPDHENKELNIGGSIVVAALEEACGTKRSKIKELYDSLGDLGDVAQLCRQT
QSLLAPPPPLSIQGVFSVLWKISEQTGSRSTARKKSLIVSLMRSCREKEMKFLVRTLVRN
LRIGAMMRTVLPALAQAVVMNASLHERTVENLKEQLQCLSAAMIESYNILPNLDLLVPCL
LEKGIAFSSVTLRMVPGIPIKPMLAKITNGIPQVLKNFQNKAFTCEYKYDGQRAQIHRLA
DGSVRVFSRNGDETTARFPDLVNIIQESCGPAAATFIVDAEVVAVDRKNGHKILSFQELS
SRERGSKDSLITVDSIKVDICVLVFDIMFANGEQLLSFPLRQRRKYFKDLFGSEKLGYFE
YAKETTIEADDASLSSESTQMKMKSFLDDALSSSCEGIMVKSLDVDAGYSPSKRSDSWLK
VKRDYVEGLGDSLDLVPIGAWHGNGRKAGWYSPFLVACYEPDTQEFQSVCRVMSGFSDSF
YVEMKEFFSGDKMLSRKPLYYQTAEVPDMWFSPELVWEIRGADFTVSPVHKAAIGLVHPS
RGISIRFPRFVRSVSDRKPEECSTSTDIADMFHSQTRKMDVSTEG
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatcactttcctccgccatccgtcaacaacaacagccatccatgtccacctcc
caaaccgtaaccctagactcctccaccctcttcctcacctctcacactactctctcccta
caatccccacccctctccttctctctcctctccacgcactcccctctcccccccctcccg
tccgacttcccccaatcaaagctcatccccagaacccggttcatcgtcgacggcttccgc
tcctccggcgaccactccgtctcgtacttcctctcccacttccactccgaccactacgcc
ggcctcaacgctaactggtccaaaggcatcatcttttgctcccacaccaccgcccgcctc
ctcatcgaggtactcaaaatatcatctttgtttgtggttccattgtctttgtctgagcct
gttttgattgatgggtgtgaggcgtcgttgatcgatgccaatcactgtcccggcgcggtt
cagtttctgttccgaatccccggtagtggtggtggcaagagtgagacgtatgtgcatacg
ggtgattttcgttattgtgattcgatgaagttagagctcggtttgactgaatttgttggt
tgtgacgctgttttcttggataccacgtattgtgatccgaagttcctgtttccatcccaa
gaagagtcgattgagtatatagttagcatgatagagagatttggggtcgaaaatgagggt
tctgtgaagtctgttttgtttcttgttgctacttatgttattggaaaggagcggattttg
cttgaaattgcacgtaggtgtaagcggaagatacttgtggatagtaggaaactagctatt
ttgcgtgttttggggttgagaaaagatgatgcatttaccgaggaagaatcagaaagtgat
gtacatgttgtggggtggaatgtgttgggtgagacttggccttattttcggcctaatttt
gtgaaggtgaaggagattatgaatgagagagggtactctaaagttgtgggttttgttccg
acggggtggacctatgaagtaaagcgcaacaagtttgcagtaaggactaaggatgaattt
gagatacatctcgtaccttatagtgagcattcaaattatgacgagctcagagaatatgtg
aggtttttgaaaccaaaacgtgttattccaacagtaggcgcggatgttgagaaacttgac
agcaaacatgctgattctatgcggaaacattttgctgggctggttgatgaaatggccatc
aaacaagaattcttgatgggttttcatcgttgtactcaggggacagatggcatggttgag
aaggatagcaccattggccagaacaaaatggaccagttcaaagaggtccaatcacctcaa
tttaagccccaggatgaaaatgatcagagaattgttttagattccttgccttttggtcgg
gaacctgttgcacaggatatagctctgttaagtgacagtgaaaaagaggaactcattcaa
caacttcgtgactgtttgcctacttgggtcactgaacttcagatgattgatctgcttagt
agctctggtggaaatattgttgatgcagtttctaatttctatgaacgggaacttgagttt
cacaaccagatcattccttgtgcctcagctgattgtacgttgcagactagcccacttaat
aaatctgtatcacctgctaaaccatgttttgttaacaaccctcttggaaatgtggttgct
tcactggataaaaaattaaaatcacccagcacaaggaatttaacaaagagcagtaattct
actggaaagaagcggagaaatgtggataataagcctaacaagaaagcaagaagcaattca
agtttggaatctactactcaaaagcaatccactattaccagtttctttactaaacgtgga
ccttgtgtttctcaatgttctggggttgaaactttgttggaggaaagcccaaatgacaaa
aatatgatgccaagtgatcctattaagtcctacaaagaggagttagaccagtttattcag
attatacatgggagtgaatcattaagaagttacgctgcagatatactcgaggagacaaag
ggggacataaatatggcactggacaagtactacagtaatcctcctgagccttacctttgc
gagaatgaaaataggttggttgacgttggaagatcggtaagggatggacccagtcattca
aattgctcttctcacatggaaaaagtgccatcagattcagaggcattggaaaacatggaa
aatttgtctgtgccaattctgtcacccgagaatgctgcaacgactcctgtatcgctacca
gcagaacaatattctcctgtagagcatgcatgctggaggcatggaaagcctgcgccttat
atacatcttgcgcggacttttgacctagttgagggcgaaaagggaaagataaaggctaca
tcaatgttatgcaatatgttcagaagcttattggccttgtctccagaagatgtgctccct
gctgtatacttgtgtacaaataagattgctcctgaccatgaaaataaggaactaaatatc
ggtggaagtattgttgtagcagcactggaagaggcctgtgggaccaagagatctaaaatt
aaggaactatatgacagcttaggcgatcttggtgatgttgctcaactctgccgacaaaca
cagtcacttctggcccctcctccacctctctcaatccaaggtgtattttctgtgctctgg
aagataagtgaacaaacaggtagtcggagtactgctcgaaagaaaagccttattgtaagt
ctcatgcgttcttgtagagagaaggagatgaagtttcttgtcagaactttggtcaggaat
ctacggattggggcaatgatgagaactgttttgcctgcgttagcccaagctgttgtcatg
aatgcttctcttcatgagagaacagttgaaaatttaaaggagcaacttcagtgcctttca
gcggccatgattgaatcatataacatacttccaaatttggatctacttgtcccttgtctc
ttggagaaaggcattgcattttcttctgtaactcttagaatggttccaggcataccgatc
aagcccatgcttgccaaaattaccaatggaattccacaagtgttgaagaactttcagaat
aaagcatttacatgtgaatataaatatgatggccagcgtgcccaaattcacagattggct
gatggatctgtgcgtgtcttttcacgaaacggggatgaaacaacagcgaggtttcccgat
ttagtcaacataatccaggaatcatgtggtcctgctgctgcaactttcatagtggatgca
gaggtagtcgctgttgataggaagaatggccacaagattttatccttccaagaactatct
tcccgtgagagaggcagtaaagattccttgattacagtggacagcataaaggtggacatt
tgtgtgcttgtctttgatatcatgtttgctaatggagagcagttgttgagtttccctctt
cgccaaagacgaaaatattttaaagatctgtttggtagcgagaagttgggttattttgaa
tatgcaaaggaaacaacgatagaagcggatgatgccagtttgagcagtgaatccacacaa
atgaagatgaagtcttttctggatgatgcactgagctcctcgtgtgaagggataatggtc
aagtctctggatgttgacgccggatattctccatcaaagcgttctgattcttggttaaag
gtcaagcgtgattatgtagaaggacttggcgattcccttgatttagtaccaattggtgct
tggcatgggaatggaagaaaagcaggatggtatagtcctttcctcgtggcttgctatgag
cctgatactcaggaatttcaaagcgtttgtcgtgtcatgtctggcttctcagattctttc
tatgtagagatgaaagagtttttctctggggacaaaatgttatccagaaagcctctatac
tatcaaactgcggaagtgcctgatatgtggttttctccggagcttgtgtgggagattaga
ggcgcagacttcacggtatcgccagttcacaaggctgccatcggcttagttcatccttcc
cgtggcatctccatcagatttcctagattcgtgcgttctgtatcggatagaaagccggag
gaatgtagcacatcaacagatatagctgatatgttccattctcagacacgaaagatggat
gtgagcactgaaggctaa
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