Rhododendron vialii: 131301063
Help
Entry
131301063 CDS
T09330
Name
(RefSeq) beta-hexosaminidase 3-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00511
Other glycan degradation
rvl00513
Various types of N-glycan biosynthesis
rvl00520
Amino sugar and nucleotide sugar metabolism
rvl00531
Glycosaminoglycan degradation
rvl00600
Sphingolipid metabolism
rvl00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rvl00604
Glycosphingolipid biosynthesis - ganglio series
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
131301063
09103 Lipid metabolism
00600 Sphingolipid metabolism
131301063
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
131301063
00531 Glycosaminoglycan degradation
131301063
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
131301063
00604 Glycosphingolipid biosynthesis - ganglio series
131301063
00511 Other glycan degradation
131301063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rvl03110
]
131301063
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
131301063
Chaperones and folding catalysts [BR:
rvl03110
]
Intramolecular chaperones
Others
131301063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
131301063
NCBI-ProteinID:
XP_058183166
LinkDB
All DBs
Position
9a:complement(30936867..30950402)
Genome browser
AA seq
535 aa
AA seq
DB search
MSGLNSVMVKLVIGILFLGLVFQLVASAVDVDRLNIWPMPQSVSYGHKVLYMSKDFELRT
EGSKYPDASGILKDGFSRLLYVINAPHVADGNISHFQQSLVLQGINVLISSANDELQYGI
DESYKLSVASSGDPVYAHLEAQTVYGALHGLQTFSQVCHFNFTTRLIEVRQAPWDISDQP
RFSYRGLLIDTARHYQPLPMIKKVVDSMSYAKLNVLHWHIVDSQSFPLEIPSYPKLWNGA
YSISERYTMADAAEVVSYAQRRGINVLAEIDVPGHAQSWGADYPTLWPSKDCQQPLDVSN
EFTFQVIDGILSDFSKVFKFKFVHLGGDEVNTSCWVTTPHVRNWLKKQGMNASQAYEYFV
LRAQKIALSHGYECVNWEETFNNFGNKLNQKTVVHNWLGGGVAKRVVAAGLRCIVSNQDK
WYLDHLDTSWSEFYSNEPLTNITNPKQQELVIGGEVCMWGETVDSSDIEQTIWPRAAAAA
ERLWTPYDKLAKDPRQVTGRLAHFRCLLNQRGVAAAPLAAPGRGAPREPGSCNMQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttaaattctgtgatggtgaagctggtgatcggaatcctttttcttggcctt
gttttccagttagtggcgtctgctgtagatgttgaccgcctaaacatatggccgatgcca
caatcagtgagctatgggcataaagttttatacatgagtaaggactttgagctaagaact
gaaggaagcaagtatcctgatgcttccggtatattgaaggatgggttttccagattactt
tatgtcatcaatgcccctcatgttgccgatggtaacatttcccattttcagcagtctctt
gtgcttcagggaattaatgtgctcatttcctcagccaatgatgagttacaatacgggatt
gatgagtcatacaagttatctgtcgcttcaagtggagatccagtttatgcacatcttgag
gcacaaacagtttatggggctctgcatgggctgcagacattcagccaagtttgccatttt
aacttcactaccaggctgattgaagtacgtcaagccccatgggacattagtgatcagcca
aggttctcttatcgagggctcttaattgatacagctcgacactaccagccacttccaatg
ataaagaaagttgttgattctatgtcatacgcaaaattgaatgtactacattggcacatt
gtggattcacaatcttttcccctggagataccttcatatcccaaactatggaatggagct
tattctatttcagaaagatatacaatggctgatgctgctgaggttgtgagttatgctcag
agacgagggattaatgtattggctgaaattgacgtcccaggacatgctcaatcctggggg
gccgattatcctaccctttggccatcaaaggattgtcagcagccacttgatgtcagcaat
gaatttaccttccaagtaatagatgggattctttcagatttcagtaaggtcttcaaattt
aaatttgtccacttgggcggagatgaagttaataccagttgctgggtaacaactcctcat
gtgaggaactggttgaagaagcaaggaatgaatgcatcccaagcctatgaatactttgtc
ctacgagctcagaaaatagcattatcacatggatacgaatgtgttaactgggaagagacc
ttcaacaactttggcaataagttaaaccaaaaaactgtggtgcacaactggctcgggggt
ggtgttgcgaagcgagtggttgcagcagggttgaggtgcattgtaagcaaccaagataaa
tggtatttggaccacttggatacctcatggtctgaattctattcaaatgaaccactcact
aacatcacaaaccccaagcaacaagaattggttattgggggagaggtatgcatgtggggt
gaaacagttgacagttccgatatcgagcaaaccatatggccgcgtgctgctgctgctgca
gagaggctgtggacaccttatgacaagctagccaaggatcctaggcaagtcactggaagg
ttagcacacttcaggtgtttgttgaatcagagaggagtagctgctgccccattggccgca
cccggtcgaggtgccccacgggagccaggttcctgcaacatgcaataa
DBGET
integrated database retrieval system
