Rhododendron vialii: 131320017
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Entry
131320017 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131320017 isoform X1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03420
Nucleotide excision repair
rvl04120
Ubiquitin mediated proteolysis
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131320017
04120 Ubiquitin mediated proteolysis
131320017
09124 Replication and repair
03420 Nucleotide excision repair
131320017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131320017
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131320017
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
131320017
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
131320017
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
131320017
Cul2 complex
131320017
Cul3 complex
131320017
Cul4 complex
131320017
Cul7 complex
131320017
Cul8 complex
131320017
Cul9 complex
131320017
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
131320017
TCR (transcription coupled repair) factors
Cul4-CSA complex
131320017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_16
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
131320017
NCBI-ProteinID:
XP_058206524
LinkDB
All DBs
Position
3a:complement(31897588..31900874)
Genome browser
AA seq
231 aa
AA seq
DB search
MASLDTDVTMVPAGEASGGAVPSSSTASTSSSSKKAKRFEIKKWNAVSLWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLGKLSGFQ
NYSLDSHHHNCMLIPIFALCLLSQITVSGSFRSMATKPRSLLIPIFALCLLSQITVSGSF
RSMATKPRSLLRLNSWIHLFSTQHVFKLKTRSIMFFFFAFIDANFRPRNMY
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactggacaccgacgtgacgatggttcccgcaggcgaggcctccggcggcgct
gtcccgtcttcttccaccgcatccacgtcgtcctcctccaagaaggccaagcgattcgag
atcaaaaagtggaacgccgtctctctctgggcttgggatattgttgtggacaattgtgcg
atttgcaggaaccatatcatggatctctgcattgagtgccaagctaaccaagctagtgcc
acaagcgaggagtgtactgttgcttggggggtttgtaaccatgcattccacttccactgc
atcagccgatggctcaaaacacgccaagtgtgtccattgggtaagttatctgggttccaa
aattactccctggattcacatcatcacaattgcatgttgatccctattttcgctttgtgc
ttgttgtcacagataacagtgagtgggagtttcagaagtatggccactaaaccaagaagc
ctgttgatccctattttcgctttgtgcttgttgtcacagataacagtgagtgggagtttc
agaagtatggccactaaaccaagaagcctgttgcgtttgaacagttggatccacctcttt
tcaactcagcacgtttttaagttgaaaactcgatctatcatgttttttttttttgccttc
attgatgcaaactttaggcccagaaatatgtactga
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