Rhododendron vialii: 131320124
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Entry
131320124 CDS
T09330
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131320124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvl02000
]
131320124
04147 Exosome [BR:
rvl04147
]
131320124
04090 CD molecules [BR:
rvl04090
]
131320124
Enzymes [BR:
rvl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
131320124
Transporters [BR:
rvl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
131320124
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131320124
CD molecules [BR:
rvl04090
]
Proteins
131320124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
Zeta_toxin
AAA_29
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_30
PRK
DUF87
Motif
Other DBs
NCBI-GeneID:
131320124
NCBI-ProteinID:
XP_058206700
LinkDB
All DBs
Position
3a:32819964..32830808
Genome browser
AA seq
1228 aa
AA seq
DB search
MSKTKEDDKKGPGDSPPDKPIAISVLFGCADSTDVMLMVLGTVGAVGDGASLPTLLLFVS
HLFNSLGHISPGLMLKVDQIALDLTYLAVAVLFAAFMEGYCWSKTSERQVLKMRYKYLEA
VLRQEVAFFDSQEATTAEVVDSISKDTALIQEVLSEKMPLFLFHTSQFFSGLTYATYFAW
RLSLAAFPALILLALPGIAYGKYLLHLSHKSFAEYSKANTIAEQALSSIKTVYASTAERN
IVERYASILYHTTKLGTKKGLAKGFAVGSSGLTFAIWALVAWYGSLLIMQHGAQGGQIYA
AGLSIVTAGQSLGVAFPEVKHLAEASIAAAHIFDRINRVPKIDGQDTKGIILENIRGEVE
FEHIKFTYPSRPDSIVLNDFNLRIEAGKTVALVGSSGSGKSTAIALLQRFYDANSGIVRI
DGVGIKGLQLKWLRGQMGLVSQDHALFGTSIKENIKFGKLNATMDEVMTAAMAANAHDFI
RQLPEGYDTKVGERGALLSGGQKQRISIARAIIKNPVILLLDEATSALDSESEAIVQSSL
EQASVGRTTLVVAHKLSTVRNADVIAVMSAGRVIEMGSHDDLIDKPNGHYANLANLQNQL
SNEEQDQHHNESRFSSAARSSGSRMSNASPSVFGTPLLGYPEPDAISYPPPSFTRLLGLN
APEWKQGLIGGFSAMASGFITPIYAITIGGMITDFFMTDHGEMRNAIRSKCLTFASLSVI
AMIMSPLQHFNFAYMGEHLTKRVRIKMLEKVLTFEPAWFDDEKNNSGALCGRLSNEAALV
KSLVADRVSLLVQTISAVVLAVILGLVVAWKLAVVMIAVQPLTILCFYGRKVILSSVNTK
FVRAQNISTQIAIEAVYNHRIVTSFGSVKKVLEIFDDAQNEPRKEGDKKAWLAGIGIGSA
QCITYMCWALDFWYGGKLVTEQQITGGQVFKTFFILVSTGKVIGEAGSMTSDLAKGATAV
ASVFSILDRRSLICSPENETELQKLFGGIEMKGVDFAYPGRPDNLILCQLRLEVKPGASI
GLVGNSGCGKSTVISLIQRFYDADKGTVKVDGVDIRSLNIGWYRRQMALVGQEPVLYSGS
IRDNIMFGKLDASETEVVEAAKAANAHDFISSLKDGYQTECGERGVQLSGGQKQRIAIAR
AIIRKPTILLLDEATSALDVHSEQIVQEALDRIMVGRTTVVVAHRLNTIKNLDSIAFLAN
GKVLERGTFAHLKSKRGAFYNLAKLHDT
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacgaaagaagacgacaagaaggggccgggagacagcccgcccgataaaccc
atagcaatatctgtgctcttcggatgcgctgattccacggacgttatgctgatggtgctg
ggcactgtgggagctgtcggagatggagcgtccttgcctaccctgctcttgttcgttagc
caccttttcaatagcttgggccatataagtcctgggctcatgcttaaggttgatcagatt
gccctcgacttaacatacctagccgttgctgtcttgttcgcggcattcatggagggttat
tgctggagtaaaaccagcgagcgacaggttttgaagatgcgatacaagtatttggaagca
gttctaaggcaagaagtggccttcttcgactcccaagaagcaactactgctgaagtcgtt
gatagcatatcgaaagatactgctctcatacaagaagttctcagtgagaagatgccgcta
tttttgtttcacacatcacagttcttctctggacttacatacgcgacctactttgcatgg
agactgtctttagcagcattccctgctctcattctcttagcacttcctggaattgcttat
ggcaaataccttctccatttatcccacaaatccttcgcagaatacagcaaagcgaacacc
atagccgagcaggctcttagctccattaaaactgtatatgcgtccactgcggagaggaat
atagtcgaaagatatgcatcaatcctctatcacacaacgaagctgggtacgaagaaagga
ttggcaaagggcttcgcggttgggagctcggggcttactttcgcgatatgggcgttagtt
gcttggtatgggagccttttgatcatgcaacacggagcgcaaggaggccaaatttatgcg
gccggcctttctatcgttacggctggacaatcccttggagtggccttccctgaagttaag
cacttggcagaagcctcaattgcagccgcacatatctttgatcgaatcaaccgagttcca
aaaattgacggtcaagatacaaagggaattatattagaaaatatacgtggagaagtagaa
tttgagcatatcaaattcacatacccttcacggcccgattccattgtcctgaacgatttc
aaccttagaattgaagcaggaaaaaccgttgctcttgttggttcaagtgggagtggaaaa
tcaaccgcgatcgccttgctccagaggttttacgatgcaaatagtggaattgtgcggatc
gatggtgttggtataaagggacttcagttgaaatggttgagaggacagatggggcttgtt
agtcaagaccatgcgctgtttgggacatcaataaaggagaatatcaagtttgggaaactc
aatgctacgatggatgaagtgatgactgctgctatggctgcaaatgcccatgatttcatt
aggcagcttccagaagggtatgacaccaaggttggtgaacgtggagcactcttatcgggc
gggcagaagcagagaatttctattgcaagagccattatcaagaaccctgtcattcttcta
cttgacgaagcaacaagcgcacttgactcggaatcggaggcaattgtgcaaagttccctg
gagcaagcctctgtgggaagaaccacactggttgttgcccacaaactttctacagtgaga
aacgctgatgtcattgcagtcatgagtgccggtcgtgtcattgaaatgggctcacacgat
gacctaatcgacaaaccaaatgggcattatgcaaatttggcgaatctacagaatcagctc
agcaatgaggagcaagaccaacatcacaatgaatctcgcttttcgtctgcggcaagaagc
agtggcagtaggatgagcaatgcgagcccatctgtctttggtacaccgctccttggttat
ccggaaccggatgccatatcttaccctccaccttcctttaccaggctccttggtttgaac
gctccagaatggaaacaagggctaattggaggcttctctgctatggcctctggttttatt
acacccatctatgccatcaccatcggtggcatgattactgactttttcatgactgatcat
ggtgaaatgcgcaatgcgatccgttcaaaatgtctaactttcgcttccctctctgtaatt
gcaatgattatgagtcccttgcaacacttcaattttgcctacatgggtgaacacctgaca
aaaagggtcagaattaaaatgctcgagaaagtcttgacttttgaaccagcatggttcgat
gacgagaagaacaacagtggggccttatgtggtagattgagcaatgaagctgccttagtg
aaatccctggttgcggacagagtttcccttttagtccagacaatttcagccgtggtgttg
gcagtgatcctgggattagttgtcgcttggaagcttgcagttgttatgatcgctgtgcaa
cccctcacaatcctatgtttctatgggcggaaagttatattatcttctgttaacacaaaa
tttgtaagggctcagaatataagtactcaaatagctatcgaggcagtgtacaaccatagg
attgtgacttcatttggaagcgtaaagaaagttcttgagatttttgacgacgcccaaaat
gagccgaggaaggagggggacaagaaggcgtggctagctggaattgggatcggttcggcc
cagtgtataacttacatgtgttgggcattggatttttggtatggtgggaagctagtgact
gaacaacagataacaggtgggcaagtgttcaagactttctttatattggtgagtactgga
aaagttataggtgaagctgggagcatgacttctgatctagccaaaggggccactgctgtg
gcatctgtgttctctattcttgatcggcgatcactaatttgcagtccggagaacgaaacc
gagttacagaaattgttcggtggcatagagatgaaaggagttgatttcgcatacccagga
cggcccgacaacctaatattgtgccaacttcgcctggaagtgaaacctggggcaagcatt
ggactcgtggggaacagtgggtgcgggaaatctacagtcatatcactgattcagagattt
tacgatgctgataaggggacagtgaaggtcgatggggtcgatataaggtctctcaatatt
ggttggtatagaaggcaaatggcgcttgttggccaagaaccggtgctctattctggcagc
attcgtgacaatattatgtttgggaagcttgatgcgtcggagactgaggttgtggaagct
gccaaggctgccaatgctcatgatttcatctcatcactaaaagatgggtatcaaactgaa
tgtggagagaggggagtgcaactatcaggaggacaaaagcaaagaattgccatagcaaga
gcaatcatccgaaaaccaactattttgctactagatgaagcgactagtgctcttgatgtc
cattcggagcagatagtgcaagaagcgttggaccggatcatggtcggaaggacaacggtg
gtggttgcccacaggctcaacaccatcaagaatctcgactccatcgcttttcttgccaac
gggaaggtgctggaacgaggaacctttgctcacctcaagagcaagcgcggcgccttctac
aaccttgccaagctccacgatacctag
DBGET
integrated database retrieval system
