Rhododendron vialii: 131325065
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Entry
131325065 CDS
T09330
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131325065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvl01002
]
131325065
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131325065
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131325065
Peptidases and inhibitors [BR:
rvl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131325065
Ubiquitin system [BR:
rvl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131325065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
131325065
NCBI-ProteinID:
XP_058213094
LinkDB
All DBs
Position
5a:35091565..35115463
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AA seq
1121 aa
AA seq
DB search
MTLMTPSPLDQEDDEMLVPHSDLAPNGPQPMEVVPAEAANAVDTHTVDDPPSARFTWTIE
NFTRLNTKKLYSEIFLVGGYKWRVLIFPKGNNVEHLSMYLDVADSATLPYGWSRYAQFSL
AVINHHTTKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPTRGYLVNDTVVVEADVAVR
KVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQYGLQEARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDVE
NGKYLSPDADRTVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIK
RALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RIRLKKEQEEKEQKRKEKAEAHLYTIIKVARNEDLLEQIGRDIYFDLVDHDKVRSFRIQK
QMPFNLFKEEVAKELGIPIQCQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKA
NNAELKLFLEVEPGQDLRPIPPPIKSKEDILLFFKHYDPLKEELRYVGRLLVKANGKPVE
ILTKLNELAGFSPDEEVELFEEIKFEPTVMCERIDKKLTFRGSQLEDGDIICFQKAPQVG
SSEQCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFFLELSKLHNYDDVVERVARHLGLN
DPSKIRLTAHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDVLYYEVLDIPLPELQGLK
TLKVAFHHSTKDEVVIHTIRLPKQSTVGDVIIDLKTKVELSHPSAELRLLEVFYHKIYKI
FPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDTAQNQVQVQNFGEPFF
LVIREGETLAEVKVRIQKKLQVPDEEFSKWKFAFLSLGRPDYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHSDNTPKRSYAANQVFKYLKISLTSIITALQV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgacgccttcccctttagaccaagaggatgatgagatgctagtgccgcat
tcagatttggcaccaaacggacctcaacccatggaagttgtgcctgcagaagccgctaat
gcagtggatactcatacagttgatgatccaccgtcggcacggttcacatggacaattgaa
aattttacgaggttgaatactaagaagctctactctgagattttccttgttggaggatat
aaatggagggtgctcatattcccaaaagggaacaacgtggaacatctgtcaatgtatcta
gatgttgcagattcggctactttgccatatgggtggagtagatatgctcaattcagctta
gctgtgatcaatcatcatactaccaagtttacagttaggaaagacacgcaacaccagttc
aacgcccgagaaagcgattggggtttcacttctttcatgcctcttagtgaactgtatgac
cccactagaggttacctggtgaatgatactgttgtagttgaagctgatgttgctgttcgt
aaggttgttgattactggtcacacgactcaaaaaaagagactggttatgttgggcttaaa
aaccaaggagctacttgctacatgaactctctccttcagacattgtaccatattccttat
ttcagaaaggcagtgtatcatatgccgacaaccgagaatgatatgccgtctgggagcatt
cctttggctttgcagagtttattctataagcttcagtatagcgacactagtgtagcaacc
aaagagttgacaaaatcttttggatgggatacgtatgattctttcatgcagcacgatgtg
caagagcttaacagggtcctttgtgaaaaacttgaagataagatgaagggaactgttgtg
gagggtacaatacagcagttatttgaaggtcaccacatgaactatatagaatgtatcaat
gtggactacaaatcaaccagaaaggaatcattttatgatcttcagcttgatgtaaaggga
tgccgtgatgtttatgcttcttttgataagtatgtggaggtggaacgtcttgagggtgat
aacaagtatcatgcagaacagtatgggttacaggaagcaaggaagggtgtcctgttcatt
gactttcccccggttcttcaacttcagttaaagcggtttgagtatgatttcatgcgggat
accatggtaaagataaatgaccggtatgagttccctctacaactagatcttgacgtagag
aatggaaaatatttgtcgcctgatgcagataggactgttcgcaacttgtatacacttcac
agtgttctggtacacagtggtggggtgcacggtggacattattatgcttatatccggcca
accctctctgatcagtggtttaaatttgatgatgaacgggtaacaaaagaagatataaaa
agggccttggaggagcaatatggtggtgaggaagagctaccacagacaaaccctgggttc
aacaactctccattcaagtttacaaagtattctaatgcatacatgcttgtctacatacgt
gaaagtgacaaggacaaaataatatgtaatgtggatgaaaaagacatagcggaacacctt
aggataaggttgaagaaagaacaagaagagaaggagcaaaaaagaaaagaaaaagcagag
gcacatctctacactatcataaaggttgctcgcaacgaggatcttcttgaacagattgga
cgggatatttattttgatcttgtggatcatgacaaagttcgtagtttccgtattcaaaaa
caaatgcctttcaaccttttcaaggaggaagttgccaaagagcttggtataccgatacaa
tgtcaacgtttctggttgtgggcaaagcgtcaaaaccacacataccgcccgaatcgccca
ttgacaccgcaagaggaagctcaatctgttggacaattgagagaggtatccaataaggca
aataatgcagagctaaaattgtttttggaagtggaacctggacaggatttgcggccaatt
cctcctccaatcaagagcaaagaggacattcttctatttttcaagcattatgaccctttg
aaagaggagctccgttatgttgggcggcttcttgtgaaagccaatggaaagccggtggaa
atattgacaaagctaaatgagttggctggattttctccggatgaagaagttgaactcttt
gaggaaataaaatttgaacctactgtgatgtgtgaacgcatcgacaagaagcttactttt
cggggtagtcagcttgaagatggtgacatcatttgctttcagaaagctcctcaagttgga
agcagcgagcaatgtcgctaccctgatgttccgtcatttctagaatatgtgcataatcgg
caggttgttcgcttccgttctttggagaaacccaaggaggatgagttttttcttgaatta
tcgaagcttcacaattatgacgatgttgttgaaagagttgcccgccatcttggcctgaat
gatccatcaaaaataaggcttacagctcataactgctactcccagcaacctaagccacag
ccaatcaagtatcgaggagtggaacatctatcagacatgctagttcactacaatcagact
tccgatgttctttactatgaggtattagatatccctctaccagaactgcaaggcctgaaa
actctaaaggttgctttccatcattctaccaaggatgaagttgtaattcatacgattaga
ttgccaaaacaaagcactgttggcgatgttattattgaccttaagacaaaggttgagttg
tctcatccaagtgcagaacttagattgcttgaagttttctatcataagatctataagatt
ttcccactcaatgaaaagattgagaacattaatgatcagtactggacattacgtgcagag
gagatcccagaggaggagaagaaccttggtccacatgaccgtcttattcatgtttatcat
ttcatgaaagatacagctcagaaccaagtgcaggtccagaattttggggaaccttttttc
cttgtcatccgtgagggtgagacgttggctgaagtcaaagtacgcatacagaagaaactg
caggttcctgatgaagagttttcgaagtggaagtttgcgtttttatctttgggtcgtcct
gattaccttcaagactcagacatcgtctctagtcgttttcagagaagggatgtttatggt
gcttgggaacagtacctcgggttggagcactctgacaatactcctaagaggtcatatgca
gcaaatcaggtatttaaataccttaaaatttctttaacaagcattattacagccttacag
gtttag
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integrated database retrieval system
