Rhagoletis zephyria (snowberry fruit fly): 108359347
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Entry
108359347 CDS
T08513
Name
(RefSeq) fibroin heavy chain
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
SSDB
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Paralog
GFIT
Motif
Pfam:
Pericardin_rpt
Motif
Other DBs
NCBI-GeneID:
108359347
NCBI-ProteinID:
XP_017466664
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MLPFRWAFIGIALLIAATNGAVITSADGNEAESNYDVTNEQFDLDRSKRSGRGYMRGQTQ
SQYLNFGKPEQDGKAEAEANEHGSRTTVSGSHGMGQAQSQFSMGDCTECATPPIYEYPAG
SPDPLTLISGRPDALISAPGTGAGSQQPGGIYGPSGTSAAGGPGAAGALRPGGVVGPGGV
YPGGRGGGRLDGALRPSAGLQPGAGYAPGIGGQPTGPGGLPGRDGVQPGGPLRPSAGVQP
GGGYVPGYGSQISGPGGAGIGGGIQPGAALRPGAGLQPGTAYGPAAGQQTGPGGIGVGAL
RPSAGLQPGTVGQPGGGYGLGQIGGPGAVGTGGALRPGEAGAAPAGGGYGPGVGRQPLGA
DGVAAQPSGGLRPGGVYRQEAGGQPIGPGGLAGGDVPAGGDIRTGAGFQPGGAYGPTAGY
PTGTDGRGVGGAGADLRPGALIQAGPQLSGQPGASGVPQPSSGFRPGVGAQPEITYGPHT
SRQPTGPGAVGGGGVQPGGYGPGGGFQPGARLRPGQGYEAAGVQPGYDGVYRPVAAGAVD
TSGIYRPSERAGGQPGTQAYGPGTIGQQAGPGVGAYPGHAYAPSGVYGPGEAGAPTGPGG
RYGYGHPGAGIQAGAGVHPGFGAQPGAGFQPGAGLQPGAGAHPGVGYQPGAGLQPGAGVQ
PGAGYHPGAGLQPGAGLQQGAGVHPRAGYQPGAGLQPGAGLQPGAGVHPGAGYQPGAGLQ
PGAGLQPGAGVHPGAGYQPDAGLQPGPGLQPGAGVHPGAGYQPGAGLQPGAGLQPGAGVY
PGAGYQPGAGLQPGAGLQPGAGVYPGAGYQPGAGLQPGAGLQPGSGVHPGASYQPGAGLQ
PGPGVYPGPGYQPGAGVHPGAGYQPGAGLQPGAGYQPGAGLQPGAGLQPGAGLQPGAGVY
PGAGYQPGAGLQPGAGLQPGAGLQPGAGVYPGAGYQPGAGVQPGAGLQPGAGVHPGVGYQ
PGAGLQPGAGYQPGAGLQPGAGLQRGAGLQPGAGIQPGGGYQLGAGPQPGAGYQPGAGLQ
PGAGVQSGAGQQPGAVYQPGAGLQPGAGYQPSGGLQPDARLQPGAGYAPGFGAQAAGQPE
LGVQPGTGYSPGAGDIYSAGVGGVPSGTYPSLPQAVSTYGPGVGIGAGAPAGEAYGQGAA
PGSGTFAPIEAAGTGVGGVGGTGVLPGGVSAEPGAIGYPGAAASGGGALGEYKEEGPSSL
ITAAGAGGADDAFSQAESSISDGQAAASAQGKKNGGTAKTQVSGTYSSTGTFSASASTSD
SDRSANAQVSGNSDGAMSQSQGQGGAAQSQSQVQVNSKNGGTKASSQSGGIIHQSQSEVQ
ANDKGGLADSQSSGPGQTSSQAQIGFRPNQEGSAAPPTSGGGQASAQSGSHSGQSQSQIQ
GTSKFGVSYHGAAQSASGTKEQVASYREQNRELFHSISQFGNSDGVTDRVDAVYSGPGVS
ALSADGGALPDLDLKSSKSVKEIVNANKVTDDDSTINEDEEEEPYDEYDDEDEYYNENSN
GKLDTKSDSKSGSDSQTPYRTYSQNSPSQSQQAAVPSSSDKYLLVQNQNGRVQKYPFRST
TEMVPRGFRGTVNVEKKFHPKAVKSQPTDNDLDSVEEQSTNKQRTPDSYVTVTKSITGSM
DNTKNPPQENKNFQSTYYTKSSTCGYFTFSCNIVYGANGRSKICRPKAPTNGKC
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctttcgttgggctttcatcggcatcgcgctgttgattgcagctacaaatgga
gcagttataacttcagcagatggaaatgaggcagaatcaaactatgatgttacgaatgaa
caatttgatttggatagatcaaaacgaagcggaagaggctatatgcgtggacaaacgcaa
tctcagtatctgaattttggtaaaccagaacaggacggcaaagcggaagcagaggctaat
gaacatggttccagaaccacagtttctggaagccacggcatgggacaggcacagagtcaa
ttttcaatgggagattgtaccgagtgtgcaacacccccaatttacgaatatcccgcaggc
tcccccgatccattgactttaataagtggtaggccagatgctttaataagtgcaccaggt
actggcgctggtagtcaacaacctggcggtatatatggcccgagtggaactagtgcagct
ggtggtcctggagctgctggagcattaagacctggtggagttgtgggacctggtggtgta
tatcctggtggaagaggtggtggtcggcttgatggtgcgttaagacctagtgcaggactc
cagcctggagcaggatatgcgccaggtattggaggtcaacctaccggacccggtggctta
ccaggaagagacggtgttcagccaggcggaccgttaaggcctagcgctggcgtgcaacca
ggaggtggttatgtgcccggctatggttcgcaaatttctggacccggaggtgcaggcatt
ggaggtggtattcagcccggtgctgctttgagacctggcgctggactacaacctggcaca
gcttacggacctgctgctggccaacaaactggtccaggtggtataggagtgggagcgtta
cgacccagcgctggattacaacccggaacagtcggtcaaccaggtggtggatatggactt
ggacaaattggcggaccgggtgcagtaggaacaggtggagctttacggcctggagaagct
ggtgctgccccagctggtggcggttatgggccaggtgttggccgacagcctcttggtgct
gatggtgttgctgcgcaacccagcggtggtttaagacccggtggtgtgtataggcaagaa
gctggtggccagcctattggaccaggaggactggcaggtggagatgttccagcaggaggt
gatataagaactggtgctggatttcagcctggtggtgcttatggaccaacggcaggttat
cctacgggaacagatggtagaggagtgggcggagccggtgctgatctcagaccaggggca
cttatacaagccggcccgcaactaagtggacaaccaggtgcctccggagttccacaacca
agttccggttttcgacctggagttggggctcaacctgagataacttatgggccacataca
agtcgccaacctactggacccggtgcggtaggcggtggtggtgtacagccaggtggatac
ggccctggtggaggtttccaaccaggtgcgcgcttaaggcccggtcaaggttacgaagct
gctggcgttcaacccggatatgacggagtatacagaccagttgcggccggagcagttgat
actagtggaatttatagaccttctgagcgtgcgggtggtcaacctggaactcaagcgtat
ggacccggtacaattggacagcaagctggaccaggcgtcggtgcatatcccggccatgct
tatgctcccagtggtgtttatgggccaggtgaagctggtgctcccactggacctgggggt
agatatggatatggtcatccaggtgctggtatacaagcgggcgcaggcgttcatccagga
ttcggtgcccaacccggtgctggctttcaaccaggtgcaggtctacaaccaggcgcaggt
gctcatccaggagtcggttatcaacctggcgcaggactacaaccaggcgcaggcgtacaa
ccaggagccggctatcaccctggcgcgggtctgcaaccaggtgctggtcttcaacagggc
gcaggcgtacatcctagagccggttatcaacctggcgctggtctgcaaccaggtgctggt
cttcaaccgggcgcaggcgtacatcccggagccggttatcaacctggcgctggtctgcaa
ccaggtgctggtcttcaaccgggcgcaggcgtacatcccggagccggttatcaacctgac
gctggtctgcaaccaggtcctggtcttcaaccgggcgcaggcgtacatcccggggccggt
tatcaacctggcgcaggtctacaaccaggtgctggtctacaaccgggcgcaggcgtatat
ccaggagctggttatcaaccaggtgcaggtctacaaccaggtgctggtctacaaccgggc
gcaggcgtatatccaggagctggttatcaaccaggtgcaggtctacaaccaggtgctggt
ctacaaccgggctcaggcgtacatccgggagccagttatcaaccaggtgcaggtctacaa
ccaggcccaggcgtatatcctggacctggctatcaaccgggcgcaggcgtacatccagga
gctggttatcaaccaggtgcaggtctacaaccaggagccggttaccaacctggcgcgggt
ctacaacccggcgcaggtcttcaaccaggtgctggtctacaaccaggcgcaggcgtgtat
ccaggagctggttatcaaccaggtgctggtctacaaccaggtgcaggtctacaaccaggt
gctggtctacaacctggcgcaggcgtgtatccaggagctggttatcaaccaggtgcaggt
gtacaaccaggtgctggtctacaacctggcgcaggcgtacatccaggagtcggttatcaa
ccaggtgcaggtctacaaccaggagccggttatcaacctggcgcaggtctacaacccggc
gcaggtcttcaacgaggtgcaggtctacaaccaggcgcgggcatacaaccaggaggcggc
tatcaacttggcgcaggtccacaaccaggagctggctaccaaccgggtgcaggtctacaa
cccggagccggtgtacagtctggcgcaggtcagcaaccaggagctgtttatcaacctggc
gcaggtcttcaaccaggagccggttatcaaccaagcggcggtcttcaaccagacgcaaga
ctgcagccgggcgcaggttacgctcccggattcggtgcccaagctgctggacagccagaa
ctcggcgtacaacctggcacaggttacagcccaggtgctggtgatatatatagcgctggc
gtgggtggagtgccatctggaacatacccatcacttccacaagcagtatcgacttatggt
ccaggcgttggcataggtgcaggtgcaccagctggtgaagcgtatggacaaggtgcagca
ccaggatccggaacatttgcaccaatcgaagcagcaggaactggtgtaggtggtgttggt
ggtactggtgttctgcccggtggtgtgtcagcagaacccggagcgataggctatcccggt
gctgctgcctctggagggggagcattgggtgagtataaggaggaaggtccaagcagcttg
ataacggcagctggagcgggaggagcagatgatgcattctcacaagctgaatcttccatt
agcgatggccaagcagcggccagtgcacagggcaaaaagaatggtggcactgccaaaact
caagtatccggaacatacagttcaactggaacattcagtgctagcgcttcaacttctgat
agcgaccgttcagcgaatgctcaagtgagtggaaatagtgatggagcgatgagtcaatcg
caaggacagggtggcgcggcacagtcgcaatctcaggttcaagtcaactcgaagaatggc
ggtactaaagcttcttcacagagtggcggcataatacatcagagccagagcgaggtgcaa
gcaaatgacaaaggaggtttggccgattcacagtctagtggaccgggacaaacttcgtcg
caagctcaaatcggttttcggcctaatcaagagggtagcgctgcaccaccgactagcggt
ggaggccaagcgtctgcgcaatctggcagccattcaggccaaagtcagtcgcaaattcag
ggcacatcgaagtttggcgtttcctatcatggtgccgcgcagtctgcttcgggcactaaa
gagcaagtggcaagttatcgcgaacagaatcgtgaattattccacagtataagccaattt
ggaaactctgatggggtgactgatcgcgtagacgccgtgtatagcgggcctggcgtatca
gctttatcagctgatggcggtgctttacctgatctagacttaaaatcttcgaagagtgtc
aaagaaatcgtcaacgccaacaaagttaccgatgacgattctacaatcaacgaagacgag
gaggaggagccatacgatgaatacgacgatgaggatgagtactacaatgaaaactcaaac
ggaaagctggacaccaaatctgatagcaaatccggatccgattctcaaacaccttaccga
acttactcacaaaattcaccctcacagagccagcaagccgctgtgccaagttcatcggat
aaatatctattggtacaaaatcaaaatggacgtgttcagaaatatcccttccgatcgacc
actgaaatggtgcctcgcggtttccgtggtaccgttaatgttgagaaaaaattccaccct
aaggctgtaaaatcacaacccactgacaatgacctcgacagcgtcgaggagcagagcaca
aataagcaacgcacgccggatagctatgtcaccgtgaccaagtcgattacgggtagcatg
gataatacaaagaatccaccacaggaaaataaaaatttccaatcgacttactatacaaag
tcatcgacctgtgggtattttacattttcctgcaacatagtgtacggtgcgaatggtcgc
agtaaaatctgtcgtcccaaggcgccaacaaatggaaaatgttag
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