Rhagoletis zephyria (snowberry fruit fly): 108363235
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Entry
108363235 CDS
T08513
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108363235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108363235
03041 Spliceosome [BR:
rze03041
]
108363235
03032 DNA replication proteins [BR:
rze03032
]
108363235
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108363235
Spliceosome [BR:
rze03041
]
Complex A
U1 snRNP components
Sm proteins
108363235
U2 snRNP components
108363235
Complex B
U1 snRNP components
108363235
U4/U6.U5 tri-snRNP components
108363235
Complex C
U2 snRNP components
108363235
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108363235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108363235
NCBI-ProteinID:
XP_017472018
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MTIGKNNKMIQHLNYRVRIMLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE
REEKRVLGFVLLRGDNIVSLTVEGPPPPEEGLPRVPMPGAVAGPGLGRAAGRGVPVNIAS
APAGLQGPVRGVGGPAQQHMTPMGRGVPRNPMIGAPLPGMVPGVMPPMPGGMGRGGPPMR
GPPPGMMRGPPPGRGGY
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgacgattggtaaaaacaacaaaatgatccagcacctcaactatagagtgcggatcatg
ctgcaagactcccgcactttcataggcacttttaaagcatttgacaaacacatgaattta
atattgggcgattgtgaagaatttcgtaaaatacgttcgaagaactccaaagtaccagaa
cgtgaggaaaaacgagttttgggttttgtgttattgcgtggtgataacatagtctcactc
accgtcgaaggtccaccaccaccagaggaaggtttgccgcgtgtaccgatgcccggagca
gttgcgggtcctggtctgggtcgtgctgctggtcgtggtgtaccagttaatattgcttct
gcgcctgctggcttacaaggtccagtaagaggtgtaggtggaccggcccaacaacatatg
acgccaatgggtagaggtgtgccgcgaaatccaatgattggtgcaccacttcctggaatg
gtgcccggcgtaatgccaccaatgcctggtggaatgggacgtggtggtccaccaatgcgg
ggaccgccacccggtatgatgcgtggtccaccaccgggacggggaggttattaa
DBGET
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