KEGG   Rhagoletis zephyria (snowberry fruit fly): 108363235
Entry
108363235         CDS       T08513                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108363235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rze03019]
    108363235
   03041 Spliceosome [BR:rze03041]
    108363235
   03032 DNA replication proteins [BR:rze03032]
    108363235
Messenger RNA biogenesis [BR:rze03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     108363235
Spliceosome [BR:rze03041]
 Complex A
  U1 snRNP components
   Sm proteins
    108363235
  U2 snRNP components
    108363235
 Complex B
  U1 snRNP components
    108363235
  U4/U6.U5 tri-snRNP components
    108363235
 Complex C
  U2 snRNP components
    108363235
DNA replication proteins [BR:rze03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     108363235
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 108363235
NCBI-ProteinID: XP_017472018
LinkDB
Position
Unknown
AA seq 197 aa
MTIGKNNKMIQHLNYRVRIMLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE
REEKRVLGFVLLRGDNIVSLTVEGPPPPEEGLPRVPMPGAVAGPGLGRAAGRGVPVNIAS
APAGLQGPVRGVGGPAQQHMTPMGRGVPRNPMIGAPLPGMVPGVMPPMPGGMGRGGPPMR
GPPPGMMRGPPPGRGGY
NT seq 594 nt   +upstreamnt  +downstreamnt
atgacgattggtaaaaacaacaaaatgatccagcacctcaactatagagtgcggatcatg
ctgcaagactcccgcactttcataggcacttttaaagcatttgacaaacacatgaattta
atattgggcgattgtgaagaatttcgtaaaatacgttcgaagaactccaaagtaccagaa
cgtgaggaaaaacgagttttgggttttgtgttattgcgtggtgataacatagtctcactc
accgtcgaaggtccaccaccaccagaggaaggtttgccgcgtgtaccgatgcccggagca
gttgcgggtcctggtctgggtcgtgctgctggtcgtggtgtaccagttaatattgcttct
gcgcctgctggcttacaaggtccagtaagaggtgtaggtggaccggcccaacaacatatg
acgccaatgggtagaggtgtgccgcgaaatccaatgattggtgcaccacttcctggaatg
gtgcccggcgtaatgccaccaatgcctggtggaatgggacgtggtggtccaccaatgcgg
ggaccgccacccggtatgatgcgtggtccaccaccgggacggggaggttattaa

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