Rhagoletis zephyria (snowberry fruit fly): 108372344
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Entry
108372344 CDS
T08513
Name
(RefSeq) uncharacterized protein YMR317W-like
KO
K11833
ubiquitin carboxyl-terminal hydrolase 2 [EC:
3.4.19.12
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rze01002
]
108372344
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108372344
Enzymes [BR:
rze01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108372344
Peptidases and inhibitors [BR:
rze01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108372344
Ubiquitin system [BR:
rze04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108372344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
108372344
NCBI-ProteinID:
XP_017483496
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MIDINKIRNNFEKFPSLKQKCGDHAAVLVQQQQKRQHINSNSNSNKNAHKITATATPTEP
KTAAVKTLKTTIAASKPTNTNTSVVNGKSEATRRSPIAVGRRAASASSTRNTKAANNSSN
TTNNNLNNDTNPVRTANKPFFLVPQFQDQNFLKEECELAHAQVAVPGAEKRQSKSASVSI
DGHVGELNNNKNIISNATNLKSSSNGCRNSCDGGKGNNNNKTSHSYAINGIIGGKRRPTT
APHPSAATVAAVTANGMRRSGGGSANASVNISQHHHHQHISSAAAAATTPATTTTAAAVA
ETQNGASTKSATTDSSVHKVDIVFNNRLPSQQTNGGRIVVASKSPKQPQQHMFNSSRPLT
GTSTNATKTIGTPTSTSVSGGASTSTVVTTKVTNGPIKLVRPLVHRSIPSTAVASANATA
TRDNVNAYSNKLFNSYGSNSSRFSNNNNNNNNSASVVGNVISGGNSGGCNNNISSNKTDG
SSGAGAIGVNGMQHTLEHDDIKYIDSDDAPTTLAQAPTAAAAAAAAAPTTSSSGGGAQLE
RKTQLRCEQVCCQHTNSATPASTGGGSGGSDSAPFKTRMRPKSTIICSTSNLVFEKINNY
KYANGSASGGGSSAAKFAAEAAAARRHELRHSIDSNSIRASIQKFDSFSEQKRSGVAQVT
LRSHGGSGSTSNLQHHRHSGSEFDHATGNSSLLRLAQSGGGSLTRAPYRTASPSPATACK
VTATMHGTTLAACSTGSSSSSIRTMSSSSATSSTNSLPTKSAGSIVAASTTAAAVSANRH
PEVSLLRTSESAAHTALLQIKDVAGVGSKKVETKMMNGDVKKCAKAETNGLCNGAAGDVD
SIRSTALRSIPPAPPSPTASRYWDRDSRTITSSALSSSPSSATNNIDDVSKSKSSDENSE
GLCGLRNIGNTCFMNSVIQCLSHTSELTKFLRTYNGTRSTSSKDQQILQEFAKLIREMWT
SNVHSVTPMDLKRAFSLKHRMYSDYNQQDAQEFLRFFLDSLHCALNTGVKGEHLKIDDNL
SDNKKADLTWEWYARHENSLIRDLFVGQLKSALRCTSCGNTSVTFDPFWDLSVSLPSLSR
CKLESCLDLFIREEVLDGDEMPTCAKCRQRRRCTKSFTIQRFPKYLVIHLKRFSETRWSK
LSNIVEFPTGERELNMGPYGSNPNTNIYYSLYAISNHMGSTAGGHYVALCKHPVSRKWHE
FNDNIVSDTLSESNLVSSSAYILFYERV
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgatagatatcaataaaataagaaataattttgaaaaattcccatcactcaagcaaaaa
tgtggtgaccatgcagctgtattagtacagcaacaacaaaaacgtcagcacatcaactca
aattccaactcaaataaaaacgcccataaaataacagcaaccgcaacgccaacagaacca
aaaacagccgccgtcaaaaccctaaagacaacaattgcggcctccaaaccaacaaacaca
aatacgtctgttgtgaacggcaaatcagaagcgacacggaggtcgcccattgctgttggc
aggcgtgcggcgtcggccagcagcacgcgcaacaccaaagctgctaataatagcagtaac
acaacaaacaataacctcaacaacgacacaaatcccgtgcgcaccgctaataagccattc
tttttggtgccacaatttcaagatcaaaacttcttaaaggaggaatgtgaattggcgcat
gcgcaggtcgcagtaccgggcgcagagaagcggcaatcaaaatcagctagtgtgtcgatc
gatgggcatgtgggtgagttaaataacaacaagaacatcatcagcaacgcaactaatctc
aagagcagcagcaacggttgccgaaacagctgcgacggcggcaaaggcaacaacaataac
aaaactagtcactcttacgctattaacggtattatcggtggcaaaaggcgtcccacaact
gcaccacatccatcagcggcaacagtggcggcggtaacagctaatgggatgcgacgcagc
ggtggcggcagcgccaacgcaagcgtcaacattagtcaacatcatcaccaccaacacatc
agttcagcagctgcagcagcgacaactcctgcaacgacaacgacggcggccgcggtagca
gagacacagaacggcgcttcaaccaagagcgccacaactgattcctccgtccataaagtc
gacattgtcttcaataatcggctgccgagccaacaaaccaacggtggtcgtattgtcgtc
gcttccaagagtccgaaacagccacagcaacatatgttcaacagttcacgtccgctcaca
ggcacatcaacaaacgccacaaaaactattggcacgccgacaagcacaagcgtaagtggt
ggcgcgtcaacatcaacagtggtgacgactaaggtgactaacggtccgatcaaattggtg
cgtccgctggtgcatcgcagcattccatcgacagctgtggcgtctgctaacgccacggca
acgcgcgacaacgtcaacgcatactctaataagctgttcaacagctacggcagcaatagc
agtcgatttagcaataacaacaacaataataataatagcgctagcgtcgttggtaatgtc
ataagcggcggcaacagcggtggttgcaataataatatctctagcaataaaactgacggc
agcagtggcgctggcgctatcggtgtcaacggcatgcagcacacgctcgaacacgacgat
atcaagtatatagacagcgatgacgcgccgacaacgttggcgcaggcacccacagccgca
gccgctgctgctgctgctgcacccaccacatcctcaagcggcggtggcgcgcagttggag
cggaaaacacagttgcggtgcgagcaggtgtgttgtcagcataccaacagcgcgacgcct
gcaagtactggcggtggcagcggcggtagcgatagcgcgccattcaagacgcgcatgcgc
cccaaatcgacgatcatctgctccactagcaatctcgtctttgagaaaatcaacaactac
aagtacgccaatggcagcgcaagcggcggcggcagtagcgcggccaagtttgccgccgaa
gcagctgcagcgcgccgtcatgagctgcgccacagtatcgattcgaatagcatcagagcc
tcgattcagaaatttgatagttttagcgagcaaaagcgcagcggggttgctcaggtgaca
ctgcgctcacacggcggcagcggtagcacaagcaacctgcaacatcatcgccatagcggc
agcgagttcgaccatgccaccggtaacagcagtttgttgcgactggcgcaaagcggcggt
ggttcgttgacgcgcgcgccctaccgcacggcatcaccctcaccagcaactgcttgtaaa
gtaactgccaccatgcatggaacgacattggcggcctgttcaactgggtcctcctcatca
tctatacgcactatgtccagcagcagcgctactagtagcactaatagtttgcctaccaaa
agcgcggggagcattgttgctgcttcaactacagcggccgctgtctccgccaatcgccat
ccagaagtgtcgctattgcgtacatcggagagcgctgcccatactgcactcttgcaaatc
aaagatgttgcgggagtggggtcaaagaaggtggaaacgaaaatgatgaatggcgatgta
aagaaatgcgcgaaggcggagacgaacggtttgtgcaacggcgccgccggagatgtagat
agtattcgcagcacagccctcaggagtattcctccagcgccaccatcgcccacagcgtct
cgatactgggatcgtgacagtcgcacaataacatcgtcggcactctcctcgtctccatca
tcggcgacaaataacatagacgatgtgagcaagtcgaagtcgagcgatgagaatagcgaa
ggtctatgcgggctgagaaatatcggaaatacttgttttatgaattctgtcatacagtgc
ctgagtcacaccagcgaattgacaaaattcttgcgaacatacaatggcacacgttccacc
tcttcgaaggatcaacaaatcttacaagagtttgcaaagttgatacgcgaaatgtggacc
agcaatgtgcatagcgtcacgcctatggatttgaagcgcgcattttccctaaaacatcgc
atgtatagtgactacaaccaacaggatgcgcaagaatttctacgcttctttctcgattca
ctgcattgtgcgctgaatacaggcgtgaagggtgaacacttgaaaatcgacgataacctt
agcgacaataaaaaagcggatctaacatgggaatggtacgcccgccacgaaaactcactc
atacgcgaccttttcgtcggccaactgaagagtgctttacgctgtaccagctgcggaaat
acgagcgtaactttcgatccgttttgggatttgagtgtgtcgttgccatcattgtcacgt
tgcaagctagaatcttgtctagatctgttcatacgcgaagaggtgttggacggcgatgag
atgccaacctgtgcgaaatgtcgccaacgaagaagatgtacgaaaagcttcaccatacaa
cgatttcccaaatatttggttatacatttgaagcgtttctcggagacgcgctggagcaag
ttatcgaatatcgtcgaatttccgactggtgaacgagaattaaatatgggtccatacggt
tcgaaccccaacacgaatatatattattcattgtatgcgatttcaaaccatatgggttct
accgctggtggtcactatgtggcattgtgtaaacacccggtatcaagaaaatggcatgag
tttaacgataacattgtaagcgacacgctgtccgaaagtaatctagtgtcatccagtgcc
tatatactgttctatgagcgagtgtaa
DBGET
integrated database retrieval system
