Rhagoletis zephyria (snowberry fruit fly): 108375590
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Entry
108375590 CDS
T08513
Name
(RefSeq) neurogenic locus Notch protein
KO
K02599
Notch 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04320
Dorso-ventral axis formation
rze04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108375590
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108375590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
EGF_3
Notch
NOD
Ank_4
Ank_3
Ank_5
NODP
EGF_2
JAG1-like_EGF2
TERB2
Motif
Other DBs
NCBI-GeneID:
108375590
NCBI-ProteinID:
XP_017487224
LinkDB
All DBs
Position
Unknown
AA seq
2422 aa
AA seq
DB search
FQGKHCEDNIDDCPGNLCQNGGTCVDSINTYRCVCPPNFTGDLCEEDVDECAMRPSVCQN
GATCTNTHGNYSCICVNGWEGRDCSDNVDDCVAAACFYGATCIDGVGSFYCRCTPGKTGL
LCHLDDACTSNPCHADAICDTSPINGSYTCSCATGYKGVDCSEDIDECDQGSPCEHNGIC
VNTPGSFMCNCSQGFTGPRCETNINECESHPCQNEGSCLDDPGTFRCVCMPGFTGTQCEI
DIDECQSNPCLNGGTCHDMINGFKCSCALGFAGTRCQINIDDCQSQPCRNNGICHDSIAG
YTCECPPGYTGTSCEININDCDSNPCHRGKCIDGDNSFKCVCDPGFTGYLCQTQINECES
NPCQFGGHCIDRVGSYLCKCLPGTSGKNCEINVNECHSNPCNNGATCIDGINKYTCECVP
GFTGLHCEININECASNPCANNGVCMDMVNGYKCECPRGFYDARCLSDVDECASNPCING
GRCEDGINEFICHCPPGYGGKRCEIDIDECSSNPCQHGGICIDQLNSFQCQCMPGYTGYR
CETNIDDCIMNPCVNGGSCIDLVNGYKCVCKVPFTGRDCESKMDPCSTHRCRNDAKCTPS
PNFLDFSCSCKLGYTGRYCDEDIDECALSSPCRNGATCLNVPGTYKCLCAKGYEGRDCAI
NTDDCASFPCQNGGTCLDGIGDYTCLCVDGFDGKHCETDINECLSMPCQNGATCRQYVNS
YTCTCQLGFSGINCQTNDEDCTESSCMNGGTCIDGINSYNCSCLPIYTGSNCQYKINKCD
SQPCQNGATCHESGDEYTCHCPHGYTGKQCTEYVDWCSQSPCENGATCSQIKNQYNCKCA
AGWTGKLCDVEMVSCEVAAMRKQVGLKQLCNNGTCKEMGNMHLCQCKQGYTGSYCQTDIN
ECESQPCQNGGTCLDRVGEYKCMCPKGFQGQNCELNIDDCSPNPCQNGGTCHDLVQSFSC
SCPPGTLGIICEINQEDCVPGACHNNGTCIDRVGGFECACPAGFVGSRCEGDINECLSNP
CSNAGTLDCVQLVNNYHCNCKPGYMGRHCEIKVDFCANSPCQNGGLCSTKQSGHHCVCPV
GFYGKNCEFSGNDCDSNPCQSGNCVVDMMRGYRCECPPGTEGMQCEIDTMDECASNPCLH
GAACENLLGDYVCFCPSKRPGKRCEIYDANYPGWASDNSRGPLNKYTKDLEYQREMCIKR
GCEQKKGNHRCDQDCNTYACNFDGNDCSLGINPWVNCTANIECWRVFMDGQCNEECNNAA
CLFDGRDCAKKLQPCNPTYEAYCQKHYADGHCDYGCNNAECNWDGLDCENTLEQPNLADG
AISVVMLMDTKTFREKQVEFLREMGHVLRTTVRIKKDSMGNDMIFTWKGTSQLTELQNSD
FGRKHRILTSERNDQTGIQIYLEIDNRKCIDCFNRAAEAAEFLAASASKYTLSPKFNIYS
VRGVQNPGEDVEERPSNVKYVLIGISIVVFAFLGVLVTTQRKRAHGITWFPENFRTTTAT
PVNHQRRRRDTGQEMRNLNKNPSIACMSNDVNMNSGHMGHAPQWSDDESELPPQKRMRND
LGGYASDHTMVTDYEEADPRVWSQAHLEVADVRSSIMTPPAHQDGKHDVDVRGPCGMTPL
MVAAVRGGGMDTGEDIENTEDQTAQVISDLLAQGAELNATMDKTGETSLHLAARYARADA
AKRLLDAGADANCQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAA
RLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDET
PLFLAAREGSYEACKALLDNFANREITDHMDRLPRDVASERLHHDIVRLLDEHVPRSPQM
MALTPQTMIGSPPPGSQAQIISQPTVISSSKQTAQSAKSKAAKKAKLLEGSPDNLLDGGS
LRRKPGSKKGAGGSVSKKGGQNGLTAAQLLNGLGGGLTTHGQGLEGVDQQQLLDAGLSAV
DSPPLTGLTSQPSPYDTSSLYSNAMAAPTHHHNDLLGNSNGAKQPPSYEDCIKNAQTMQS
LVQQQQQNNMDLIKMENYVYSRGSPFHQEMIGQKGNNQQSMNSLCGGGGGGGNLGHNLPG
NMAGHEQGLSPPYSNQSPPHSVQSSMALSPHAYLGSPSPVKSHPSLPTSPTHMQALRHAT
HQKQFGSNVNSLLGGAANNNNNSNSTNGPQSNASMNSPQSMSFQSPSSQSLSQQSSPVSV
GIVSPTGSDGMMMAPQQTQQQQQQQQQQQQQQQQQQQQLQQQQQQQQQQQQNSKSSAIMQ
TMQQHQQQLASLDFASAGLDLNGFCGSPDSFHSGQMNPPSIQSTMSGSSPATNMLSPSSQ
HNQAFYQYLTPTSQHSGGHTPQHLVQTLDSYPTPSPESPGHWSSSSPRSTSDWSEGVQSP
AANNLYMSGGHQANKGSEAIYI
NT seq
7271 nt
NT seq
+upstream
nt +downstream
nt
gctttcaaggcaaacattgcgaagataacatcgatgactgtcctggaaatttgtgtcaga
atggtggcacttgcgtcgacagcatcaacacctaccgttgcgtctgtccaccaaatttta
ccggagatctctgtgaggaagatgtggatgaatgcgcgatgagaccatccgtttgtcaga
atggcgctacttgcaccaatacgcacggcaactattcctgcatatgtgtcaacggttggg
aaggtagagattgcagcgacaatgtcgatgattgcgtagctgcagcctgcttctatggcg
ccacatgcatagatggcgtcggctcgttctattgtcgttgcacacctggcaaaactggtc
tcctctgtcatttggatgatgcttgcacctcgaatccttgtcatgcggacgctatttgcg
acactagtcctataaatggctcctacacttgttcctgtgcaactggctacaaaggcgtgg
attgttccgaggacatcgacgaatgtgatcagggttcaccttgcgagcacaatggaattt
gtgtgaatacacccggctcgtttatgtgtaattgctcacaaggcttcacgggtccacgct
gtgagacgaatatcaacgagtgcgaatcgcatccgtgtcagaatgagggtagctgcttgg
atgacccaggcacctttcgttgcgtttgtatgcccggctttactggcacacagtgcgaaa
tcgatattgatgagtgtcagtcgaacccatgcttgaacggcggcacctgtcacgatatga
ttaacggttttaaatgttcgtgtgcgctggggtttgcgggtacgcgttgtcaaatcaata
tagacgattgccagtcgcagccttgtcgaaataatggcatatgtcacgactctatagccg
gttatacgtgtgaatgtccgcctggttatacgggcacctcctgtgagatcaacatcaacg
attgtgactcgaatccctgtcatcgcggcaaatgcatcgatggtgacaactcattcaaat
gtgtctgcgatcctggtttcaccggctacctctgccagacgcaaatcaacgaatgtgagt
cgaatccgtgtcagtttggtggccactgcattgatcgcgtcggttcttacctctgcaaat
gtctacccggtacttcgggcaagaattgtgaaattaatgtgaatgagtgtcacagcaacc
cgtgcaacaatggcgccacgtgcattgacggcatcaacaagtacacttgcgaatgcgtgc
ctggctttacgggactacattgcgagatcaacatcaatgagtgcgcctccaatccatgcg
ccaacaacggcgtctgcatggacatggtgaatggttataaatgcgaatgtccgcgtggtt
tttacgacgcacgctgcctgagtgatgtggatgagtgcgcctcgaatccatgcatcaatg
gcggtcgttgtgaggatggtatcaacgagttcatttgtcactgcccacctggctatggtg
gcaaacggtgcgagatcgatatcgacgagtgcagttcgaatccttgccaacacggtggca
tttgcatcgaccaactgaactcctttcaatgccagtgcatgcccggctacacaggctacc
gctgcgaaacgaacattgacgattgcattatgaatccctgtgtgaatggcggctcctgca
ttgatttggtaaatggttataagtgtgtttgtaaagtaccgtttacgggcagagactgtg
aatcgaaaatggatccgtgttcaacccatcgttgccgcaatgacgcgaaatgcacgcctt
cgcctaacttcctggacttttcctgctcttgcaagctcggctacactggccgctattgtg
acgaagatatcgacgagtgtgcgctgtcatcgccttgccgtaatggtgcgacctgtctca
atgtacccggcacctacaaatgtctatgcgcgaaaggctacgagggacgtgattgcgcta
tcaacaccgacgattgcgcttcgttcccatgtcagaatggtggcacgtgtttggacggca
tcggcgactatacgtgcctttgcgttgacggattcgatgggaaacactgcgaaacggaca
tcaacgaatgcctcagcatgccttgtcagaatggtgcgacctgtcggcagtatgtcaact
cgtatacatgtacgtgtcagcttggcttttcgggcatcaactgtcagaccaacgacgaag
actgcaccgaaagttcctgcatgaatggcggtacttgcatagacggtatcaacagctaca
actgttcttgtctgcccatttacaccggctccaattgtcaatacaagatcaataagtgcg
actcgcagccctgccaaaatggcgccacgtgtcacgaaagtggcgatgagtacacgtgtc
actgtccacacggctacacgggaaaacagtgcacggagtatgtggactggtgttcgcagt
cgccctgcgagaatggagccacttgttcacagattaagaaccagtataattgcaagtgtg
ctgccggttggacaggcaagctctgcgatgtggagatggtttcttgtgaagtggctgcga
tgcgcaaacaagtcggtctcaaacaactctgcaacaacggcacctgcaaggagatgggca
acatgcatttgtgtcaatgcaagcagggctataccggcagctattgtcagacggatatca
atgagtgtgagtcacagccttgtcagaatggcggcacttgtttggatcgcgtgggcgaat
ataagtgtatgtgcccgaaggggttccaggggcagaactgcgaattgaacatagacgatt
gctcgccgaacccgtgccagaatggcggcacatgccacgatttggtgcaatccttcagct
gctcatgtccacctggcacattgggcataatttgcgaaatcaaccaggaggattgcgtac
caggcgcttgtcacaacaacggtacttgcatcgatcgtgtgggtggcttcgagtgcgcct
gtccagcaggttttgtgggttcacgttgtgagggagacatcaatgaatgcctgtctaatc
cctgctcgaatgccggcactttggactgcgtgcaactggtaaacaattaccattgcaact
gcaagcccggctacatgggacgacactgcgaaattaaggtagacttctgcgctaattcgc
catgtcaaaatggcggtctttgctctacgaaacagtctggtcatcattgcgtttgtccgg
ttggtttctacggcaaaaattgtgagttctccggtaacgactgtgattcgaatccctgcc
agtcgggtaactgcgtagtggatatgatgcgcggctaccgctgtgagtgtccgcctggca
ccgaaggcatgcaatgtgaaatcgatacgatggacgaatgcgcttcgaatccatgcttgc
atggcgctgcatgcgaaaatctactgggtgactatgtctgcttctgccccagtaaaaggc
cgggcaaacgatgtgagatttacgatgccaactaccccggctgggcatcggacaacagcc
gtgggccgctcaataaatacacgaaggatctggaataccaacgcgaaatgtgtatcaagc
gcggctgcgaacagaagaagggcaatcacaggtgtgaccaggactgcaacacgtatgcgt
gcaactttgacggcaacgactgctcattgggcatcaacccttgggtgaattgcactgcga
atatagagtgctggcgcgtgttcatggatggccagtgcaatgaggagtgcaacaatgctg
cttgtttgttcgatggtcgtgattgcgccaagaaactacaaccatgtaatccgacttatg
aagcctactgtcagaaacattatgcggatggtcattgtgattatggctgcaataatgctg
agtgcaactgggatggcttagactgtgaaaatacactcgagcaaccgaatttggctgatg
gcgctatatctgtggtgatgctgatggacaccaaaactttccgcgaaaagcaggtggaat
tcttacgtgaaatgggtcatgtactccgcactacggtgcgcatcaagaaggactccatgg
gcaatgacatgatcttcacctggaaaggcacttcgcaattgactgaactgcaaaactcgg
acttcggacgcaagcacagaatactaaccagtgagcgcaatgatcaaacgggcatacaaa
tatacctggaaatcgataatcggaagtgcatcgactgtttcaatcgcgccgccgaagctg
ccgagttcctggcggcttctgcatccaaatacacgctctcgccaaagttcaacatctaca
gcgtgcgtggcgtacaaaaccccggcgaagatgtagaagaacgtcccagcaacgtaaaat
acgtactcatcggcatcagcattgtggtattcgcattcctcggtgtacttgtgactacgc
aacgtaagcgcgcgcatggcatcacgtggttcccagaaaatttccgtaccacaaccgcta
caccggttaatcatcagcgacggcgacgtgacactggccaggagatgcgcaatttaaaca
agaatccttcaattgcttgcatgagcaacgatgtcaacatgaactccggtcacatgggcc
acgcaccgcaatggtcggacgatgagtccgaattgccgccacagaagcgcatgcgcaacg
atctcggcgggtacgccagtgatcacacgatggtaaccgactatgaagaagctgatccac
gcgtttggtcgcaggcgcacctcgaagtagccgatgtgcgttcgtcaattatgacgccgc
ccgcgcaccaggatgggaaacacgatgtggatgtgcgcggaccgtgcggcatgacaccac
tcatggtagcggctgttcgcggtggaggcatggatactggcgaagacattgaaaacactg
aggatcaaacggcacaggtgatttcggatttgttggcgcagggtgctgaacttaacgcca
ccatggacaaaactggcgaaacttcactgcacctggcagcgcgttatgcgcgcgctgatg
ctgccaaacgtttactggacgctggtgccgacgccaactgtcaagataacaccggtcgta
caccactgcatgccgctgtggccgccgatgcaatgggcgttttccagatactgctgcgaa
accgcgctaccaatttgaatgcgcgtatgcatgatggcaccacaccgctaatactcgccg
cacgcctagccattgaaggaatggttgaagatctaataactgctgatgctgatatcaatg
ctgccgacaactcgggtaagaccgcgctccattgggcagccgctgttaataataccgaag
ccgtgaatatactactcatgcatcatgccaatcgtgacgcccaggacgacaaggatgaga
caccactatttctagcagcgcgcgagggctcctatgaagcgtgcaaagcgctgctcgaca
actttgccaatcgcgaaatcaccgatcacatggaccgtttgccacgcgatgtggcctccg
agcgcttgcaccatgacatcgtgcgcctgctcgatgaacatgtgccgcgctcaccgcaaa
tgatggcgctgacgccacagaccatgataggctcgccaccacctggcagccaagcacaga
tcatctctcagcccactgttatttcatcatcaaaacagacagcacaatctgcgaaatcaa
aagcggcgaaaaaggcaaagctattggagggcagcccggacaatttgctcgacggtggca
gtctgcgacgcaaaccgggttcaaaaaagggggcagggggctcggtgtcaaaaaagggcg
gacaaaacggccttacggcagcacagctgctgaatggcttgggtggtgggctgacaacgc
acggccagggactggagggagtggaccagcagcagctgttggatgccggtctcagtgcgg
tggactcgccaccactgacggggctaacaagtcagccgagcccgtacgacacgtcgtcac
tctattccaacgcgatggcggcaccaacacaccaccacaacgatctgttaggcaacagca
acggcgcgaaacaaccacccagctatgaagactgcataaagaatgcgcaaacaatgcaga
gcctagtgcagcaacagcagcaaaataatatggatttaatcaaaatggagaattacgttt
actcgcgtggttcgccctttcatcaggaaatgatcggccagaaaggcaacaatcagcaaa
gcatgaattcgctttgcggcggtggaggcggaggtggcaatctcggtcacaatctgcccg
gcaacatggccggtcatgagcaagggctaagtccgccctattccaatcaatcgccaccgc
attccgtgcagagcagcatggcgctttcgccgcacgcttatttgggttcaccatcgcccg
tcaaatcacatcccagcctacccacctcacccacacacatgcaggcgctgcgccatgcga
cccatcagaaacaatttggtagcaatgtgaattcgctgctgggtggcgctgccaacaaca
acaacaacagcaactctacaaatggcccacagagtaacgcgtcgatgaattcgccgcaga
gcatgagttttcaatcgcccagcagtcagagtttgtcgcaacagagttcaccggtgagtg
tgggcattgtatcgccgacgggtagtgatggcatgatgatggcgccacagcaaacccagc
agcagcaacagcaacaacaacaacagcagcagcagcagcaacaacaacagcaacagctgc
agcaacaacaacaacagcagcagcagcagcaacagaattcgaaaagcagtgcaataatgc
aaacaatgcaacaacaccaacaacagctggcgagcctcgatttcgcatcggccggcttgg
atttgaatggattttgtggatcgccagattcctttcattccggccaaatgaatccaccct
cgatacagagtacaatgtcaggttcctcgcccgccaccaatatgctctcgccatcctccc
aacacaatcaggccttctatcagtatctgacaccgaccagtcagcactctggcggccata
ccccccaacatctggtgcaaacgctcgacagctatcccacaccatcacccgaatcgccgg
gtcactggtcgagttcgtcgccacgttccacatcggactggtccgagggtgtacaatcgc
cggcggccaataatctttacatgtccggtggacatcaggccaacaagggttcagaggcga
tttatatttga
DBGET
integrated database retrieval system
