Staphylococcus aureus RF122: SAB2005c
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Entry
SAB2005c CDS
T00303
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
sab
Staphylococcus aureus RF122
Pathway
sab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAB2005c (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sab03021
]
SAB2005c (rho)
03019 Messenger RNA biogenesis [BR:
sab03019
]
SAB2005c (rho)
Transcription machinery [BR:
sab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SAB2005c (rho)
Messenger RNA biogenesis [BR:
sab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAB2005c (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Spore_III_AA
ATPase_2
Mor
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
CAI81694
LinkDB
All DBs
Position
complement(2134856..2136172)
Genome browser
AA seq
438 aa
AA seq
DB search
MPERERTSPQYESFHELYKNYTTKELTQKAKTLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQPDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPDERIKLETETQNYSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAISTNKPDAKLFILLVGERPEEVTDLERSVEAAEVVHST
FDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSLTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLSE
RRIFPAIDIGRSSTRKEELLISKSELDTLWQLRNLFTDSTDFTERFIRKLKKSKNNEDFF
KQLQKSAEESTKTGRPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagagaacgtacatctcctcagtatgaatcattccacgaattgtacaagaac
tatactaccaaggaactcactcaaaaagctaaaactcttaagttgacgaactatagtaaa
ttaaataaaaaagaacttgttctagctattatggaagcacaaatggaaaaagatggtaac
tattatatggaaggtatcttagatgatatacaaccagatggttatggttttttaagaaca
gtgaactattctaaaggggaaaaagatatttatatatctgctagccaaattcgtcgtttt
gaaattaaacgtggggataaagtaactgggaaagttagaaaacctaaagataacgaaaaa
tattatggcttattacaagttgactttgttaatgaccataacgcagaagaagtgaagaaa
cgtccgcatttccaagctttgacaccactttatccagatgagcgtattaaattagagaca
gaaacacaaaattattcaacgcgcatcatggatttagtaacaccgattggtttaggtcaa
cgtggtttaatagtggcgccacctaaagcaggtaaaacatcgttattaaaagagatagcg
aatgcaatcagtacgaacaaaccagatgcaaagctatttattttgttagttggcgagcgt
cctgaagaggtaacagatttagaacgctcagtagaagctgctgaagtcgttcattcaacg
tttgacgaaccaccagaacaccatgttaaagtagctgaattattacttgaacgtgcaaag
cgtttagtagaaattggggaagatgtcattattttaatggattctataacgagattagca
cgcgcttataacttagttattccaccaagtggtcgtacattatcaggtggtttagatcct
gcatctttacacaaaccaaaagcattcttcggtgcagcgagaaatattgaagcaggtgga
agtttaacaatacttgcaactgcattagttgatacgggttcacgtatggacgatatgatt
tacgaagaatttaaaggaacaggtaacatggagttacatttagatcgtaaattgtctgaa
cgtcgtatcttccctgcaattgatattggcagaagttcaacgcgtaaagaagaattgttg
ataagtaaatctgaattagacacattatggcaattaagaaatctattcactgactcaaca
gactttactgaaagatttattcgcaaacttaaaaagtctaagaataatgaagatttcttc
aagcagctacaaaagtctgcagaagaaagtactaaaacgggtcgacctataatttaa
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