Allosaccharopolyspora coralli: GIY23_06580
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Entry
GIY23_06580 CDS
T06288
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
sace
Allosaccharopolyspora coralli
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sace03000
]
GIY23_06580
Transcription factors [BR:
sace03000
]
Prokaryotic type
Helix-turn-helix
XRE family
GIY23_06580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_31
HTH_3
Peptidase_M78
HTH_19
HTH_26
HTH_37
EAD11
DDE_Tnp_IS66
Motif
Other DBs
NCBI-ProteinID:
QGK69245
UniProt:
A0A5Q3QCP0
LinkDB
All DBs
Position
complement(1379222..1380688)
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AA seq
488 aa
AA seq
DB search
MQDFAAEEDRSFSTDQDLLVFGQRLRHLRRTAGLTLVDLGERVGRAPSQLSLLENGHREP
KLSLLRSLADALGCTVDDLMSKKPPNRRAELEIAVEQAQLDPLYQRLSLPPLKAGKRMPT
EALEHVAGLYEELKRRETKQVATPEEARKANAQLRHTMREHGNYFPEIEKAAAEILDKVG
YHGGALSEGVIQSIATHLGYGLRFVNDLPRSVRSVTDMHHQRIFLRRESLGMHSPRTILL
QTLGHLTLGHSQPRDFADFLRQRVEANYFAAAVLVPEKTAVPFLQKAKADRDLAVEDLRD
VYSVSYEMAAHRFTNLATQYLDLVCHFVRNDETGIIYKAYENDGLVFPTDASGAIEGQRM
CRHWAGRQVFASPDRYSTYYQYTDKPGATHWCVAHVDPSRGRDFAITLGVPYTESRWFRG
RDTTNHSQSKCPNGECCQRPPADLANRWQGMVWPSARAHSHVLAALPSDTFPGVDEADVY
RFLEDHDA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttcgccgccgaagaagaccgtagtttttccaccgatcaggatcttctggtg
ttcggccagcggctgcggcacctccgcaggaccgccggcctcaccctcgtcgacctggga
gaacgtgtcggtcgcgcgccgtcacagctctctctgttggagaacggccatcgcgagccg
aagttgtcgttactccggtcactcgccgacgccctgggctgcaccgtcgacgacctcatg
tccaagaagccgccgaaccggcgcgccgagctcgagatcgccgtcgaacaggcccagctc
gacccgctgtaccagcggctgagcctgcccccgctcaaggcaggcaagcggatgcccacc
gaagcactggaacacgtcgccggtctctacgaggagctcaagcggcgcgagaccaagcag
gtcgccaccccggaagaagcgcgcaaggccaacgcccagctgcgccacaccatgcgcgag
cacggcaactacttccccgagatcgagaaagccgcggccgagatcctcgacaaggtcggc
taccacggtggggcgctgtccgaaggcgtgatccagtccatcgcgactcacctcggctac
ggtctgcggttcgtcaacgacctgccacgctcggtgcgctcggtgaccgacatgcaccac
caacggatcttcctgcggcgcgagtccctcggcatgcacagtccgcgcacgatcctgctg
cagaccctcgggcacctcaccctcgggcacagccagccacgcgacttcgccgacttcctg
cgccagcgcgtcgaggcgaactacttcgccgccgccgtcctggtgcccgagaagaccgcg
gtccccttcctgcagaaagccaaggccgaccgcgacctcgcggtcgaggacctgcgggac
gtgtactcggtgtcctacgagatggccgcacaccggttcaccaacctcgccacccaatac
ctcgacctggtgtgtcacttcgtccgcaacgacgagaccggcatcatctacaaggcctac
gagaacgacgggctggtctttcccaccgacgccagcggtgccatcgagggccagcggatg
tgcaggcactgggcgggcaggcaggtgttcgcctcccccgaccggtattcgacctactac
cagtacaccgacaagcccggcgcgacacactggtgtgtcgcccacgtcgaccccagccgc
ggccgcgacttcgcgatcaccctcggcgtcccgtacaccgagtcgcggtggttccgcgga
cgcgacaccacgaaccattcgcaatcgaagtgcccgaacggcgagtgctgccaacgcccg
ccggccgacctcgcgaaccgctggcagggcatggtgtggccgtccgcgcgggcgcactcc
cacgtcctcgccgcactcccctcggacaccttccccggcgtggacgaggccgacgtctac
cgcttcctcgaagaccacgacgcctga
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