Saccharopolyspora sp. ASAGF58: FDZ84_03685 Help Entry FDZ84_03685       CDS       T06538                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism sacg  Saccharopolyspora sp. ASAGF58 Pathway sacg03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:sacg00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     FDZ84_03685  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sacg03400]     FDZ84_03685 Enzymes [BR:sacg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      FDZ84_03685 DNA repair and recombination proteins [BR:sacg03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      FDZ84_03685 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_C DNA_ligase_A_M RNA_ligase Motif Other DBs NCBI-ProteinID:  QIZ33998 UniProt:  A0A6H1R0W7 LinkDB All DBs Position complement(842548..843543) Genome browser AA seq 331 aa AA seqDB search MNDPLCLLDDAERGELRSWPGGTWHEPALATLTHHRFSDPDWIFERKLDGARVIAGCDAD RPVLWSRNHKRVDAAYPEIIDALAEQGADRFVLDGEMVAFEGGQTSFARLQKRINLTDPR AARRTGVAVYYYVFDLIAFGGVDLTNLSLRTRKRLLRECFDFTDPLRFSAHRAGNGEEFY REACRRGWEGLIAKRADRPYRGGRSRDWLKFKCVADQEFVVGGYTDPKGSRFGFGALLVG YYADSRLRYAGKVGTGYDERTLRELRGKLDELARDGSPFADPVAERDVHWVAPELVAQVG FTEWTGDGKLRHPRFSGLRNDKRPQDVVREA NT seq 996 nt NT seq  +upstreamnt  +downstreamnt atgaacgatcctttgtgcctgctagacgacgccgaacgcggtgaactgaggtcctggccc ggcggaacctggcacgagccggcgctggcgacgctgacccaccatcggttctccgacccg gactggatcttcgagcgcaagctcgacggggcgcgggtgatcgccggctgcgacgcggac cggccggtgctgtggtcgcgcaaccacaagcgggtcgatgccgcgtacccggagatcatc gacgcgctcgccgagcagggcgccgaccggttcgtgctggacggcgagatggtcgccttc gagggcggccagacgagcttcgcccggctgcagaagcgcatcaacctcaccgatccgcgc gcggcccgccgcaccggcgtggcggtctactactacgtgttcgacctgatcgccttcggc ggcgtggacctgacgaacctgtcgctgcgcacccggaaacgcctgttgcgcgagtgcttc gacttcaccgatccgctgcggttcagcgcgcaccgggccggcaacggcgaggagttctat cgcgaagcgtgccgccgcggctgggagggcctgatcgccaagcgcgccgaccggccctac cgcggcgggcgcagccgcgactggttgaagttcaagtgcgtcgccgaccaggaattcgtc gtcggcggctacaccgaccccaagggctcccggttcggtttcggagcgttgctggtcggc tactacgcggactcgcggctgcgctacgcgggcaaggtcggcaccggctacgacgagcgg acgctgcgcgagctgcgcggcaagctggacgagctggcccgcgacggctcaccgttcgcc gacccggtggccgagcgcgacgtgcattgggtggcgccggagctggtagcgcaggtcggc ttcaccgagtggaccggcgacggcaagctgcggcatccccgtttttcggggctgcgcaac gacaaacgtccgcaggacgtggtccgcgaggcctag

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