Sulfolobus acidocaldarius SUSAZ: SUSAZ_03940
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Entry
SUSAZ_03940 CDS
T02975
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
sacs
Sulfolobus acidocaldarius SUSAZ
Pathway
sacs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sacs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SUSAZ_03940 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacs03021
]
SUSAZ_03940 (tfb)
Transcription machinery [BR:
sacs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SUSAZ_03940 (tfb)
Prokaryotic type
Archaeal type
TFB
SUSAZ_03940 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
HTH_AsnC-type
Cyclin_C
Sigma70_r4
HTH_24
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_Crp_2
HTH_11
HTH_23
RB_B
Motif
Other DBs
NCBI-ProteinID:
AHC51212
LinkDB
All DBs
Position
complement(642742..643665)
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AA seq
307 aa
AA seq
DB search
MVEQSKVPSSSLCPPDKIIFDEERGEYICTETGEVIEERIIDQGPEWRAFTPEEKEKRSR
VGGPLNQTIHDMGISTVIDWKDKDAMGRSLDPKRRLEVLRWRKWQIRTRIQSSIDRNLAQ
AMNELERIGNLLNLPKAVKDEAALIYRKAVEKGLVRGRSIESVVAASIYAACRRMKMART
LDEIAQFTKANRKEVARCYRLILRELDIEVPVSDPKDYVTRIGTLLSLSGITMKHAAEII
EKAKNSGLTAGKDPAGLAAAAIYIAALLNDERRTQKEIAQVAGVTEVTVRNRYKELTQEL
KIQIPSQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacaaagtaaggttccttcttcctccctatgtccacctgacaagataatattt
gatgaagaacgtggagaatatatttgtactgagacaggtgaagtaatagaagaaagaata
attgatcaaggtcctgagtggagggcatttactccagaggagaaagagaagaggagtaga
gtaggtggacctttaaatcaaacaattcatgacatgggaatatctactgttatagattgg
aaggacaaagatgcaatgggaaggtctttagaccctaagaggagattagaagtactaaga
tggagaaaatggcagataaggacaaggatccaatcctcaatagacagaaatctagcacaa
gctatgaatgagcttgagagaattggtaatttactcaatttgcctaaagcagttaaggat
gaagctgctctaatttacagaaaagccgtagagaaaggattggtcagaggaagaagtatc
gagagtgtagttgcagcttcaatttatgcagcatgtagaagaatgaaaatggctagaaca
ctagacgaaatagcccaattcacgaaggctaataggaaagaagttgccagatgttatagg
ctaatactgagagaattagatatagaagtaccagttagtgatcctaaggattacgttact
agaataggtactctgttaagtttaagtggtataacaatgaagcatgctgcagagataata
gaaaaggctaagaattcaggattaactgctggtaaagatcctgcgggactagcggctgct
gcaatttatatagcagcattactgaatgacgaaagaagaacgcagaaggaaattgcacag
gtagccggcgtaacagaagttacggttaggaacagatataaagaattaacgcaagaatta
aagatacagattccaagtcaataa
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