Candidatus Steffania adelgidicola: GFK82_00050
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Entry
GFK82_00050 CDS
T07600
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sade
Candidatus Steffania adelgidicola
Pathway
sade00521
Streptomycin biosynthesis
sade00523
Polyketide sugar unit biosynthesis
sade00541
O-Antigen nucleotide sugar biosynthesis
sade01100
Metabolic pathways
sade01110
Biosynthesis of secondary metabolites
sade01250
Biosynthesis of nucleotide sugars
Module
sade_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sade00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GFK82_00050 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GFK82_00050 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GFK82_00050 (rmlC)
Enzymes [BR:
sade01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GFK82_00050 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
UDG79549
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Position
85510..86052
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AA seq
180 aa
AA seq
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MKVINSKISDVKIIHPRIFSDFRGFFFETFTKKRYKEMLNIDLDFVQDNYSRSSRGVLRG
LHFQKTNPQGKLVRVVRGAVFDVVVDIRLGSSTYGIWEGGILSEENKIQFWIPPGLAHGF
IVLSPLADFEYKCTDYYQPAYEDCLLWNDPEVGVNWPSYINNPILSEKDKRGKLLKEIHP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattaatagtaaaattagtgatgtaaagattattcatccaagaatatttagt
gattttcgaggttttttttttgaaacgtttacaaaaaaacgttacaaagagatgctcaat
atagatctggatttcgttcaagataattattctcggtcatctcgtggagtattacgtgga
ttgcattttcagaaaacaaatccgcagggtaaacttgttcgtgtagtgcgtggtgccgtg
tttgatgttgtcgtggatattcgtcttggttcatcaacttatggtatttgggaaggaggg
atcctgtctgaagaaaataaaatccaattttggataccgcctggtttggcgcatggtttt
atagtattgtctcctttagctgattttgaatataaatgtacagattattatcagcctgca
tacgaagattgtttgctgtggaacgatccagaagttggtgttaattggccgtcttatatc
aataatccgatactttcagaaaaagataagcgtggaaagctcttgaaagaaatacatcca
taa
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