Sphingomonas aerolata: NEF64_00300
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Entry
NEF64_00300 CDS
T08450
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
saer
Sphingomonas aerolata
Pathway
saer01501
beta-Lactam resistance
saer01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NEF64_00300
01503 Cationic antimicrobial peptide (CAMP) resistance
NEF64_00300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saer02000
]
NEF64_00300
01504 Antimicrobial resistance genes [BR:
saer01504
]
NEF64_00300
Transporters [BR:
saer02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NEF64_00300
Antimicrobial resistance genes [BR:
saer01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NEF64_00300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF4232
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
USR00350
LinkDB
All DBs
Position
70949..74143
Genome browser
AA seq
1064 aa
AA seq
DB search
MSRYFIDRPIFAWVIAIILMLAGVLAIRSLPIAQFPEIAAPKVTVATSYPGADAQTLENT
TTQIIEQQMKGIDNLRYFASTSDGAGNLAITLTFEQGTDADIAQVQVQNKLQQATPLLPQ
EVQQAGLRVTKATANFLLVIAAYSQDGSHDQVDLGDLIASKLQDPLSRIKGVGDTQVFGA
QYSMRIWVDPFKMSNLGVTVTDITSAITAQNAQVSAGQVGSLPAVKGQALNATVTAQSRL
QTPEQFRQIIIRSATGGATVRLADVARVEMGSENYSFQARYNGKQAAGFGVKLAPGANAL
DTVTLVKAEVEKIAKQFPADVKIAYPVDNSTFVRLSVEQVVHTLIEAIILVFLVMFLFLQ
NFRATLIPTIAVPVVLLGSLAVLQVAGFTINTLTLFGMVLAIGLLVDDAIVVVENVERLI
QEEGLSPKEAAKKSMDEISGALVGIGLVLSAVFLPMAFFSGSTGVIFRQFSITIVSSMVL
SVLVALILTPALCATILKPSKQDHGDKKGFFGWFNRTFDRGVDRYGKGLRRVEKGWVRTM
IVYAVIVGAMLFVFLRLPSGFLPEEDQGLMFAQVSMPTGTTMEETARTMDKLRDHFLVDE
KANIAGIFTISGFGFVGQGQNVGLAFIQLKPWEDREGDANTVAAVAQRANQALAGIRAGM
VIGFVPPAVQELGNANGFDFMLKDNAGVGHDKLLEARNMLLGMASQDKRLMQVRPNGLED
APQLKLNVDQAQAGALGLSQADINTTVSTAFGGSYINDFIDRGRVKKVFVQADAPFRKSP
ADLGNFYVRGATNAMTPMSSFSTTDWTYGPARLERYNGVASFEIMGSPAPGVSSGTAIKA
MEEMAAKLPPGIGYEWTGLSYEEQLSGGQSTYVYALSLLIVFLCLAALYESWSIPIAVLL
VVPLGVLGAVLAAMVTGLNNDIYLQVGLITTIGVAAKNAILIVEFAEEKMGDGMNAADAA
VEAAKLRLRPILMTSFAFIFGVLPLALSSGAGAGGQNAIGWAVVGGMLSATVLAIFFVPL
FFLLVKRVFKQDKQDKPGKQDGDRNRDDTRDGDTTPHDQRPQEA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctatttcatcgatcgacccatcttcgcatgggtcatcgcgatcatcctgatg
ctggccggcgtactggcgatccggtcgctgccgatcgcgcagttccccgagatcgccgcg
cccaaggtgacggtcgcgacgtcctatccgggcgccgacgcgcagacgctcgagaatacg
acgacgcagatcatcgagcagcagatgaaggggatcgacaaccttcgctacttcgcctcg
accagcgacggcgcgggcaatctcgcgatcacgctgaccttcgaacagggcaccgacgcg
gacatcgcgcaggtccaggtgcagaacaagctgcaacaggcgaccccgctcctgccgcag
gaagtgcagcaggccgggcttcgcgtgaccaaggcgaccgccaacttcctgctcgtgatc
gccgcctattcgcaggacggcagccatgatcaggtcgatctcggcgatctgatcgcatcc
aagcttcaggatccgctcagccggatcaagggcgtcggcgacacgcaggtgttcggcgcg
caatattcgatgcggatctgggtcgatccgttcaagatgtcgaacctcggcgtcaccgtc
accgacatcacctcggcaatcaccgcgcagaacgcacaggtttccgccggtcaggtcggc
agccttcccgcggtcaagggccaggcgctcaacgccaccgtcactgcgcagtcgcgtctg
cagaccccggaacagttccgccagatcatcatccgctcggccaccggcggcgccaccgtg
cgcctcgccgatgtcgcccgggttgaaatgggctcggaaaactacagcttccaggcgcgc
tacaacggcaagcaggcggcgggcttcggcgtgaagctggcgccgggcgccaacgcgctc
gacaccgtcacgctggtgaaggccgaggtcgagaagatcgccaagcagttcccggccgac
gtcaagatcgcctatccggtcgacaattcgacgttcgtgcggctgtcggtcgaacaggtg
gtccacacgctgatcgaggcgatcatcctcgtcttcctcgtgatgttcctcttcctccag
aacttccgtgccaccctcatcccgacgatcgcggtgccggtcgtgctgctcggctcgctc
gccgtgcttcaggtcgcgggcttcacgatcaacacactgacactgttcggcatggtgctg
gcgatcggcctgctcgtcgatgacgcgatcgtcgtcgtcgagaatgtcgaacgcctgatc
caggaagaggggctgagccccaaggaggccgccaagaaatcgatggacgagatcagcggc
gcgctggtcggcatcggtctcgtgctgtccgcggtgttcctgccgatggcgttcttcagc
ggctcgaccggcgtgatcttccgccagttctcgatcacgatcgtttcgtcgatggtgctt
tcggtgctggtcgcgctgatcctgacgcccgcactctgcgccaccatcctgaagccgtcc
aagcaggatcacggcgacaagaagggctttttcggctggttcaaccggaccttcgatcgc
ggcgtcgacagatatggcaagggcctgcgtcgcgtcgaaaagggctgggtgcggacgatg
atcgtctatgcggtcatcgtcggcgcgatgctgttcgtcttcctgcgactgccctcgggc
ttccttcccgaagaggatcaggggctgatgttcgcgcaggtgtcgatgcccacgggcacg
acgatggaagagactgcgcggacgatggacaagctgcgcgaccacttcctggtcgacgaa
aaggccaacattgcgggcatcttcacgatcagcggcttcggctttgtcggccagggccag
aatgtcggcctcgccttcatccagctcaaaccgtgggaggatcgcgaaggcgacgcgaat
accgtcgccgcggtcgcccagcgcgcgaaccaggccctcgccgggatccgcgccggcatg
gtgatcggcttcgtgccgcccgccgtgcaggaactgggcaacgccaacggcttcgacttc
atgctgaaggacaatgccggcgtcggccacgacaagctgctcgaggcccgcaacatgctg
ctcggcatggccagccaggacaagcgcctgatgcaggtccgtccgaacggcctggaggat
gcgccacagctcaaactgaacgtcgaccaagcccaggcaggtgcgctcgggctgagccag
gcggatatcaacaccaccgtcagcaccgcgttcggcggatcgtacatcaacgacttcatc
gaccgcggtcgcgtgaagaaggtgttcgtccaggccgatgcgccgttccgcaagtcgcct
gccgatctcggcaacttctatgtccgcggcgcgaccaacgcgatgacgccgatgtcgtcc
ttctcgaccaccgactggacctacggccccgcacgtctcgaacgttataacggcgtcgcc
tcgttcgagatcatggggtcgcccgcacccggcgtcagcagcggcaccgcgatcaaggcg
atggaggagatggcggccaagctgccccccggcatcggctatgagtggaccggcctcagc
tatgaggaacagctttcgggcgggcagtcgacctatgtctatgcgctgtcgctgctgatc
gtgttcctctgccttgccgcactgtacgagagctggtcgatcccgatcgccgtgctcctc
gtcgtgccgctcggcgtgctcggtgcggtgctcgcggcgatggtcacggggctcaacaac
gacatctatctccaggtcggcctgatcacgacgatcggcgtggcggcgaagaacgcgatc
ctgatcgtcgagttcgccgaggagaagatgggtgacgggatgaacgcggccgatgccgcg
gtcgaggccgccaagctgcgtcttcgcccgatcctgatgacctcgttcgcgttcatcttc
ggcgtgctgccgctcgcgctgtcgagcggtgcgggtgccggcggccagaacgcgatcggc
tgggcggtggtcggcggcatgctgtccgcgaccgtgctcgcgatcttcttcgtgccgctg
ttcttcctgctcgtgaagcgcgtcttcaagcaggacaagcaggacaagccgggcaagcag
gacggcgaccgtaaccgtgacgacacccgtgacggcgacaccacgccccacgaccagcgg
ccgcaggaggcctga
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