Sphingomonas aerolata: NEF64_13700
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Entry
NEF64_13700 CDS
T08450
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
saer
Sphingomonas aerolata
Pathway
saer00300
Lysine biosynthesis
saer00470
D-Amino acid metabolism
saer01100
Metabolic pathways
saer01110
Biosynthesis of secondary metabolites
saer01120
Microbial metabolism in diverse environments
saer01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NEF64_13700
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEF64_13700
Enzymes [BR:
saer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NEF64_13700
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
USR02155
LinkDB
All DBs
Position
complement(3027962..3029203)
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AA seq
413 aa
AA seq
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MKPMGALPPEFAHQSGALTIGGRSAEAWVAQAGDTPLFVYDSAIVAARIARFRTAMPAID
LHYAIKANPHSELLAAVAPLVDGLDVASAGELGMALSVKPAHAISFAGPGKRDDELAAAI
RAGATLNVESEGEATRGFAIGARLGIAPRMAVRVNPDIELRGSGMRMGGRASPFGVDAER
AAALVRDIAAAGADWRGFHIYAGSQALDAGAIIETQAATLDLAARLADAAGVAPPLVNLG
GGFGVPYFANDVALDVERVGAALHAALETRAAVLRDTRFAIELGRWLVAEAGVYLTRVID
VKQSQGEVFVVVDGGLNHQLAASGNFGTVVRRNYPLAVAARMGEAAAADAVSVVGPLCTP
LDRLGDRVALPPVVPGDLIAIFMAGAYGASASPAAFLGHPPALEIVTSVQPQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatgggggcgttgccgcccgaatttgcgcaccagtcgggcgcgctgacgatc
ggcgggcggtccgcggaggcctgggtcgcacaggccggcgacacgccgctgttcgtctat
gacagcgccatcgtcgcggcgcggatcgcgcggttccgcacagcgatgcccgcgatcgac
ctgcattatgcgatcaaggcgaacccgcattcggagctgctcgcggcggtcgcaccgctg
gtcgacgggctcgacgtcgcgtcggcaggcgagctcggcatggcgctgtcggtcaagccg
gcgcacgcgatcagctttgccggtcccggcaagcgcgacgacgaacttgccgcggcgatc
cgcgcgggcgcgacgttgaacgtcgaatcggagggcgaggccacgcgcggcttcgcgatc
ggcgcgcggctcggcatcgcgccgcggatggcggtgcgcgtgaaccccgatatcgaactg
cgcggatcgggaatgcggatgggcggccgcgcctcgcccttcggcgtcgatgcggagcgt
gcggcggcgctggtgcgcgacatcgccgcggcgggcgcggactggcgcgggttccacatc
tatgcgggcagccaggcgctcgacgcgggcgcgatcatcgagacgcaggcggccacgctc
gacctcgccgcacggctcgccgacgcggcgggcgtcgcgccgccgctggtcaatctgggc
ggcgggttcggcgtgccctatttcgcgaacgacgtcgcgctcgacgtcgaacgggtcggc
gcggcgttgcacgcggcactcgagacccgcgcggccgtgctgcgcgacacccggttcgcg
atcgagctcgggcggtggctggtcgccgaagccggcgtgtacctgacccgcgtgatcgac
gtgaagcagagccagggcgaagtcttcgtcgtggtcgatggcgggctcaaccaccagctc
gcggcaagcggcaattttggcaccgtcgtccggcgcaactatccgctcgcggtcgccgcg
cggatgggggaggcggcggcggcggacgcagtgtcggtcgtgggaccgctgtgcaccccg
ctcgaccggctcggcgaccgcgtcgcgctgccgccggtcgtgcccggcgacctgatcgcg
atcttcatggcgggcgcatacggcgccagcgcgagcccggcggcgtttctcgggcatcca
cccgcgctcgagatcgttacttcagtccaaccccagccatga
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