Shewanella aestuarii: HBH39_12090
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Entry
HBH39_12090 CDS
T06921
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
saes
Shewanella aestuarii
Pathway
saes00521
Streptomycin biosynthesis
saes00523
Polyketide sugar unit biosynthesis
saes00541
O-Antigen nucleotide sugar biosynthesis
saes01100
Metabolic pathways
saes01110
Biosynthesis of secondary metabolites
saes01250
Biosynthesis of nucleotide sugars
Module
saes_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HBH39_12090 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HBH39_12090 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HBH39_12090 (rfbC)
Enzymes [BR:
saes01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HBH39_12090 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QIR15134
UniProt:
A0A6G9QKN3
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All DBs
Position
PN3F2:complement(2762780..2763325)
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AA seq
181 aa
AA seq
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MKFIDTVIPDVKIIEPQVFGDQRGFFMETFRTKLFNEHCGERDFVQENHSKSSHGILRGL
HYQTENTQGKLVRVINGEVFDVAVDMRKTSPTFGHWVGVLLSADNKRQLWVPEGFAHGFY
VISAAAEFVYKCTDIYNPSAEVSLKWNDPTVNIQWPLVNDITPLLSAKDEVGLPFADAPK
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatcgataccgtaatacctgacgtaaaaataattgaaccacaagtatttggt
gaccaacgtggtttttttatggaaacatttcgaactaaattgttcaacgaacattgtggt
gaaagggattttgtgcaagaaaaccatagtaagtcatctcatgggatccttcgaggttta
cattatcaaactgaaaatacgcaagggaagttagttcgagttattaatggtgaagttttt
gatgttgccgttgatatgcgaaaaacctcccccacatttggtcactgggtgggtgtgtta
ttatctgccgataacaaacgtcaactgtgggtaccagaggggtttgctcatggattttat
gtgatctcagccgcagctgaatttgtttataaatgcaccgatatctataaccccagtgct
gaagtgtccttgaagtggaatgatcctacagtgaacatccagtggccattagtgaatgat
attacgcctttactgtcagctaaagatgaagtgggtttaccttttgcagatgcgcctaaa
ttttaa
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