Simiduia agarivorans: M5M_04900
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Entry
M5M_04900 CDS
T02281
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saga03021
]
M5M_04900
Transcription machinery [BR:
saga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M5M_04900
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
cwf21
Motif
Other DBs
NCBI-ProteinID:
AFU98187
UniProt:
K4KWB0
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Position
complement(1090288..1091298)
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AA seq
336 aa
AA seq
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MAVHENKRDRASLATKGAAVHSAEELLASAQEESENGKTRLTSAFEEANTYHKTLDATQL
YLNEIGFSPLLSAEEEVYFSRKALKGDESARKRMIESNLRLVVKIARRYVNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLR
AARELTQKLDHEPSPEEIATLLEKPVEDVERMLKLNERVTSMDVPMGPGSDKALVDSIPD
QQESDPSCCDPVMLLQDSDLHDSLDNWLCELTEKQREVIARRFGLRGFETSTLEEVGREI
GLTRERVRQIQVEALKRLRDILEKQGLDGEALFGAL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacatgagaacaaaagggacagagcgtctttggcaaccaaaggtgcagctgtg
cacagtgcagaagagctgttggcgagtgcacaagaagagagcgagaacgggaaaacacgt
cttaccagtgcctttgaagaggccaatacctaccacaaaacgctggacgcaacccagctg
tatctgaatgaaatcggcttttcgccgttactttctgcagaagaagaagtttacttttca
cgcaaagcgctgaaaggggacgagtctgcacgtaaacgcatgatcgagagtaacctgcgc
ctggtggtaaaaatcgcccgtcgttatgtaaatcgcggtctggcgctgttggatctgatc
gaagaaggcaatctgggcttgatacgcgcggttgaaaagtttgatccggagcgcggtttc
cggttctcgacttacgctacctggtggattcgccagacgattgagcgggccatcatgaac
cagacgcgcactatccgactgccgattcatgtggttaaggaactgaatgtatacctgcga
gcggcgcgcgagctgactcagaaactggatcacgagccgtcgccggaagaaattgcaacc
ttgctggaaaagcctgtcgaggatgtggagcgcatgctcaagctcaatgagcgggtgaca
tcgatggatgtgcccatgggcccgggttccgataaggcgctggtggattccattccggat
cagcaggagtctgacccgtcatgctgtgaccccgtcatgctgctgcaggattcggatctg
cacgatagcctcgacaactggctgtgtgaactgacagagaagcaacgtgaagtgattgcg
cgtcgctttggcctgcggggttttgagaccagcacgctggaagaagtgggccgcgaaatc
ggcctgacccgcgagcgggtacggcaaattcaggtggaggcacttaaacgcctgcgcgat
atcctggaaaagcaggggctcgatggcgaggcactttttggtgcactgtga
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