Simiduia agarivorans: M5M_08960
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Entry
M5M_08960 CDS
T02281
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
saga
Simiduia agarivorans
Pathway
saga03030
DNA replication
saga03430
Mismatch repair
saga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M5M_08960
03430 Mismatch repair
M5M_08960
03440 Homologous recombination
M5M_08960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saga03032
]
M5M_08960
03400 DNA repair and recombination proteins [BR:
saga03400
]
M5M_08960
03029 Mitochondrial biogenesis [BR:
saga03029
]
M5M_08960
DNA replication proteins [BR:
saga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M5M_08960
DNA repair and recombination proteins [BR:
saga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
M5M_08960
TLS (translesion DNA synthesis) factors
Other SOS response factors
M5M_08960
Mitochondrial biogenesis [BR:
saga03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
M5M_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
TFIIA
Lin-8
Motif
Other DBs
NCBI-ProteinID:
AFU98979
UniProt:
K4KIK2
LinkDB
All DBs
Position
complement(1989475..1989993)
Genome browser
AA seq
172 aa
AA seq
DB search
MARGINKVILVGNLGQDPETKYMPSGGAVTNVSIATSETWKDKQTGQPQERTEWHRVVFF
NRLAEIAGEYLKKGSKVYVEGSLRTRKWQGQDGQDRYTTEIVASEMQMLDGRGDMGSGGY
EQGGYSAPQQQAPQQRQQPQQNYQQQQQRPQQAQPQQAPNDGFADFDDDIPF
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaggcattaataaagtcatcctggtaggtaatctcggccaggacccggaaacc
aagtacatgcccagtggtggcgcggtcactaacgtaagtatcgcaacctctgaaacctgg
aaggataagcagaccggccagccccaggagcgcaccgaatggcatcgcgtggtgtttttc
aatcgcctggccgaaatagcgggtgagtacctgaaaaagggcagcaaggtctatgtcgaa
ggcagtctgcgtacgcgtaaatggcaggggcaggacgggcaggaccgttacaccaccgaa
attgtggccagcgaaatgcagatgttggatggccgtggcgacatgggttcaggcggctac
gaacaaggcggctactctgcacctcagcagcaggcaccacaacagcgccagcaaccgcag
cagaattaccagcagcaacagcagcgcccgcagcaggctcagcctcagcaggccccgaat
gatggctttgctgattttgacgacgatattcctttctaa
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