Sagittula sp. P11: CDO87_07815
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Entry
CDO87_07815 CDS
T05219
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sagu
Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sagu03009
]
CDO87_07815
Enzymes [BR:
sagu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CDO87_07815
Ribosome biogenesis [BR:
sagu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CDO87_07815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ribosomal_L24
Motif
Other DBs
NCBI-ProteinID:
AUC53107
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All DBs
Position
complement(1605830..1606873)
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AA seq
347 aa
AA seq
DB search
MSRVQTITVGPGDGDQRLDRWLKRLFPHVAQARIEKMCRKGELRIDGGRCKASSRIETGM
QVRIPPLPEPGQVESAPKPSFNEKDAEMIRDCVLWKDDHIIALNKPPGLATQGGSGQTRH
VDGLSEALTFGMDEKPRLVHRLDKDTSGVLLLARTRAVAKSLTEAIRHREARKIYWALVA
GVPTPYLGEIKYGLVKAPGHGKGGEAEKMRCVHPKDIATTEGAKRAHTLYATLYRVAGRA
SWVAMEPITGRTHQLRAHMAEIGHPIIGDGKYGGSGQENLGDGWGAQLGGIISKKLHLHA
RSLTLLHPVTKKPFTVTAPLPEHMKQSWDTLGWEEDFADDDPFEALH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggtacagaccatcacagtggggccgggcgacggcgaccagcggctggaccgc
tggctgaagcggctgttcccccacgtcgcccaggcccgcatcgaaaagatgtgccgcaag
ggcgaactgcggatcgacggcgggcgctgcaaggcatcctcgcggatcgagacgggcatg
caggtgcgcatcccgccgctgcccgaaccggggcaggtggaaagcgcgccgaaaccctcc
ttcaacgagaaggacgcggagatgatccgcgactgcgtcttgtggaaggacgaccacatc
attgcgctgaacaagcccccggggctggcgacgcagggcggctccggccagacccggcac
gtcgacggcctgtcggaggcgctgacctttggcatggatgaaaagccccggctcgtgcac
cggctggacaaggacacctcgggcgtgctgctgctggcgcgcacccgtgccgtggccaag
tcgctgacggaggcgatccggcaccgcgaggcgcgcaagatctactgggcgctcgtcgcc
ggtgtgccgaccccctaccttggcgagatcaagtacggcctggtgaaggcgcccggccac
ggcaagggcggcgaggcggagaagatgcgttgcgtgcatccgaaggacatcgccacgacc
gagggcgcgaagcgggcgcatacgctatacgccacgctttaccgcgtcgcgggacgcgcg
tcctgggtggcgatggagccgatcaccggccgaacccaccagcttcgcgcgcacatggcc
gagatcgggcacccgatcatcggcgacggcaagtacggcggctccggtcaggagaacctc
ggcgacggctggggcgcacagcttggcgggatcatctcgaagaagctgcacctgcacgcg
cggtcgctgacgctgctgcacccggtcacgaagaagcccttcaccgtgaccgccccgctg
cccgagcacatgaagcaaagctgggacacgctgggctgggaagaggactttgccgacgac
gatccgttcgaggcgctgcattga
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