Sagittula sp. P11: CDO87_26150
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Entry
CDO87_26150 CDS
T05219
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu00521
Streptomycin biosynthesis
sagu00541
O-Antigen nucleotide sugar biosynthesis
sagu01100
Metabolic pathways
sagu01110
Biosynthesis of secondary metabolites
sagu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CDO87_26150 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDO87_26150 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDO87_26150 (rfbC)
Enzymes [BR:
sagu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CDO87_26150 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AUC56757
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All DBs
Position
unnamed6:complement(5756..6328)
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AA seq
190 aa
AA seq
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MTEFKDTPLPGLREITPRRFGDHRGFFSESYSAKVFAENGIDTVFVQDNHSLSAAVGTVR
GLHFQSPPHAQAKLVRCGRGSIFDVAVDIRKGSPTYGQWYGTELSFENGRQLLVPAGFLH
GFMTLQPDSEIVYKCSDFYAPECDGGVRWNDPGIGITWPETGAAPVLSDKDAAAPLLADF
DSPFTWEDAA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaaggacacgcccctgcccggcctccgggagatcacgccccgccggttc
ggcgatcatcgcggcttcttcagcgagagctacagcgccaaggtcttcgccgaaaacggc
atcgacacggtcttcgtgcaggacaaccattcgttgtccgcggcggtgggcacggtgcgc
ggccttcacttccagtcgccgccccatgcccaggccaagctggtgcgctgcgggcggggt
tcgatcttcgacgtggcggtcgacatccgcaagggcagcccgacctacggccagtggtac
ggcaccgaactcagcttcgagaacggccgccagctcctggtgcccgcgggcttcctgcac
ggcttcatgacgctccagcccgacagcgagatcgtctacaagtgctcggacttctatgcg
cccgagtgcgacggcggcgtgcgctggaacgatcccggcatcggaatcacctggcccgag
accggcgccgcgccggtgctgtcggacaaggacgccgcggccccgctgctggcggacttc
gacagccccttcacctgggaggacgcggcatga
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