Salinimicrobium tongyeongense: JRG66_00755
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Entry
JRG66_00755 CDS
T08572
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
sahn
Salinimicrobium tongyeongense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
CENP-T_C
MerR_2
GH3
Motif
Other DBs
NCBI-ProteinID:
UZH55464
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Position
complement(177775..180198)
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AA seq
807 aa
AA seq
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MALDEYIKKRDFQKTPEPDAAYEKHKGKLRFVIQRHRATRLHYDLRLEMEGVLKSWAVPK
GPSMNPDDKRLAIMTEDHPIKYLSFKGTIPKGNYGAGEMSIWDEGTYEAAGGEGERDLLK
MLKKGDLKITFFGTKVKGTFALVHTRRGGEKDNQWLLIKKADDFSTDLSYDAENLSEHAG
REKVKHLEVNKLIKPMLATRAKEIFNKANWIFELKWDGYRALASIQKGKVDLYSRNGISF
KAKFKEIYEQLKNIPHDVVLDGEIVALDKSGKPVFQKLQNYQKAPSGELRYYVFDLLHLN
GHNIMHLPLLERKSLIPEVVEDIPQVYYCDHVESMGKAFFEQAVEMGMEGVIAKKADSQY
IPASRSDKWLKIKAFESQEALICGYTQSDKGGAFGSLILGMHRDEELVYIGNCGTGFSED
DKKELFDKFQDVVTEAMPFKKKPSLKGRTPTWLIPELICEINFSEWTRSGHMRHPSFKGL
RMDKLPQEVTKEKTAKVPRHKPVAKKEENTLEIGGIAVPISNLDKVYWPKSGLRKYDLIE
YYLKISEAILPFLRDRPQNLHRHPNGILEEGFYQKDTAGIFPHWLESTKVFSKHNNRELE
YIMCQNEASLIYMANLGCIEINPWNSRVQNLLHPDFTVIDIDPSEKNTFEEVIEVAQAAK
EVLDKAKIASYPKTSGSSGIHIYIPLGAKYTYDEARDFTKILCYFIQEKLPDLTSMERNV
KKRKGKIYLDFLQNRKGQTLAAPYCARPKPGATVSAPLEWHEVQAGLDMRDFTIKTMPAR
IEEKPDLFKPVLGKGIDIEKAIEALSG
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgacgagtacatcaagaaaagggattttcagaaaacccccgaacccgatgct
gcctatgaaaagcacaagggaaaactgcgatttgtaattcagcggcaccgggcaacccgc
ctgcattacgacttgcgccttgaaatggaaggtgttttaaagagctgggccgtacccaaa
gggccgtctatgaaccctgatgataagcggctggcgatcatgaccgaagaccaccccata
aaatacctcagttttaagggcaccattcccaaaggaaattatggggcaggggagatgagc
atttgggatgaaggcacttacgaggctgcaggtggcgaaggagaaagagaccttcttaaa
atgctgaaaaaaggcgatcttaaaattaccttttttggcaccaaagtaaaggggactttt
gcccttgtgcatacccgcagaggcggggaaaaagacaatcagtggctgcttatcaagaag
gctgatgatttttctacagacctgagttatgatgccgaaaacctgagcgaacacgccggc
cgggaaaaagtaaaacatcttgaggtcaataaactgatcaaacccatgcttgccaccagg
gcaaaggagatcttcaataaagccaactggatttttgaattaaagtgggatggttaccgg
gctttggccagtatccaaaaaggcaaagtagacctgtactccaggaacgggatctcgttc
aaagccaaattcaaggaaatttacgaacagcttaagaatattccgcatgatgtggtgctc
gacggggagatcgtggcccttgacaagagcggaaaaccggtttttcaaaagcttcagaat
taccagaaggcaccttcgggagaattgaggtattatgtgtttgacctgttgcacctaaac
ggccacaacattatgcacctgccacttttagaaaggaaaagcctaattccggaggtggta
gaagacattccgcaggtatattactgcgaccatgtagagagcatgggaaaagcctttttt
gagcaggctgtggaaatgggcatggaaggtgtgatcgccaaaaaagccgattcgcagtac
attcccgcttcgagaagtgataagtggctgaagataaaagcctttgaaagccaggaggca
ttgatttgcgggtatacacaatcggataaaggaggggcgtttggttctttgattttgggg
atgcaccgcgatgaggagcttgtttatattgggaactgcggaacgggctttagtgaagat
gataaaaaggaacttttcgacaaatttcaggatgtggtgactgaagccatgccttttaaa
aagaagccttccttaaaaggacgcacgcccacctggcttatcccggaattgatctgcgaa
atcaatttttctgaatggacacggagcggacacatgaggcacccttcgtttaaaggcctg
cggatggataaacttccgcaggaagttaccaaagagaaaacggcaaaggtgcccaggcac
aaacctgtggcaaaaaaagaagaaaacacgctggaaattggaggaattgcagtgcctata
agcaacctcgacaaggtgtactggccaaaatcgggcctcagaaaatacgacctcattgaa
tattacctgaaaataagtgaggcaattttgccctttttgagggacaggccacagaatttg
caccggcaccccaacggcatactcgaagaagggttctaccaaaaagatacggcgggtatc
tttccgcattggctggaatcgaccaaggtattttctaagcacaacaatcgcgaactggaa
tatattatgtgccagaatgaagccagtcttatctacatggcgaacctgggatgtatagaa
atcaatccgtggaattcgagggttcagaacctgcttcatcccgattttaccgtgattgac
atagacccttcagaaaagaacacttttgaagaggtgatagaagttgcccaggctgcaaaa
gaagtgctggacaaagctaaaatagcgagttaccccaagacttcaggttctagtgggatc
catatttacattccgctgggcgcgaaatacacttatgatgaagcccgcgattttactaag
atcctgtgttattttattcaggaaaaactccccgatctcacttcgatggagcggaatgtg
aaaaaaaggaaaggcaaaatttacctggattttcttcaaaaccgaaaggggcagaccctt
gccgccccttattgtgcccggccaaaacccggcgcaacggtttcggccccgcttgaatgg
catgaagtgcaagccggacttgacatgagagactttacgattaagaccatgccggccagg
attgaagagaagccagatctctttaaacccgtgttgggaaagggaattgacattgagaaa
gctattgaagcgctttcaggttag
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