KEGG   Salinarchaeum sp. IM2453: K0C01_09985
Entry
K0C01_09985       CDS       T07444                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
saim  Salinarchaeum sp. IM2453
Pathway
saim03030  DNA replication
saim03410  Base excision repair
saim03420  Nucleotide excision repair
saim03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:saim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K0C01_09985
   03410 Base excision repair
    K0C01_09985
   03420 Nucleotide excision repair
    K0C01_09985
   03430 Mismatch repair
    K0C01_09985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saim03032]
    K0C01_09985
   03400 DNA repair and recombination proteins [BR:saim03400]
    K0C01_09985
Enzymes [BR:saim01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     K0C01_09985
    6.5.1.6  DNA ligase (ATP or NAD+)
     K0C01_09985
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     K0C01_09985
DNA replication proteins [BR:saim03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    K0C01_09985
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     K0C01_09985
DNA repair and recombination proteins [BR:saim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     K0C01_09985
   NER (nucleotide excision repair)
    Other NER factors
     K0C01_09985
   MMR (mismatch excision repair)
    Other MMR factors
     K0C01_09985
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme DUF1510 PNKP_ligase
Other DBs
NCBI-ProteinID: QZA88118
UniProt: A0A8G1H666
LinkDB
Position
2084944..2086623
AA seq 559 aa
MQYADLVDVYADLEDTSSTLEKTAILSDCFSKVDDTDLPRVVRLVRGKVFAPWESEDIGI
STSLMSDAIAKATGIDSTQIETWWRERGDLGNAAAVAINQRQQQPLFSESLTVEQVYETL
REVATYEGDGSQQRQIDTVSGLLTHTSPSEARYLVRTVVGAMRLGVGEGLVRDAIADAFF
GTEGGKSAVKQAYEVTNDFAIVAERARSGDKSALAELDVELFRPIKPMLAKKSEDIDTAV
SELSDASGAVLLEAKYDGIRAKIHKQNDEIRVFTRRLEEVTRQFPDVVAAAGEQITADEY
IIEAEVVAYDPKSHDPVPFQELSRRIKRKYDIDELVETVPVRTYLFDLIQLDGTSYIECP
LRERLSHLEEILDPDQQRIARAEHLQTNSVEQAQNFYENVLSAGHEGVMAKNLDATYQPG
SRVGYQQKIKPTMEPLDLVVTRAKWSEGRISDFLGRPYLACRNNNGFSEVGRMHTGFTDA
QLEEFMDLVEPLIREVDGREAKLKPEVVLEVEYEEIQKSPQYDSGYALRFPRLKRIRHDL
DPDDTDTIDRVKELYQQQS
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgcagtacgctgatctcgtcgacgtgtatgcagacctcgaagataccagctcaacgctt
gagaaaacagccattttgtcggattgcttcagcaaggttgacgatacggatcttcctcgt
gtcgtcagactagttcgtgggaaggtatttgcgccatgggagtcagaagatattggcatt
tcaacatctctaatgagcgatgccattgctaaggcaacaggaatcgactcaactcagatt
gaaacgtggtggcgcgaacgtggtgatctgggtaacgccgctgctgttgcaatcaatcag
cgccaacaacaaccccttttttccgaatcactgactgttgaacaagtatatgaaacactt
cgtgaagtagcaacatacgaaggagatggaagccagcaaagacagattgatacggtctct
ggactcctaacccatacctctccgagcgaagctcgatatcttgttcgtactgttgttgga
gcgatgcgtttgggcgtcggcgaaggacttgtccgtgatgcaattgccgatgcgttcttt
ggtactgagggtggaaaaagtgcagtcaagcaggcttatgaggtgaccaatgattttgcg
atagttgctgagcgggccagatccggcgataaatccgcacttgctgaacttgacgttgag
ttattccgcccaatcaaaccgatgttggccaaaaaatctgaagatattgacacggcggtt
tctgaactctctgatgcttctggagctgtactactagaggctaaatacgatggtatccga
gcaaaaattcacaagcagaatgatgaaatacgcgttttcacccgtcggctagaggaagtt
acaaggcaattccctgatgttgtcgctgctgcaggagagcagattactgctgatgagtac
atcatcgaggcggaagtcgttgcgtatgatcccaaatctcatgacccagtaccatttcaa
gagctatcccgacgtatcaaacggaagtatgatattgatgagcttgtagagaccgtgcct
gttcgcacctacttatttgatctcatccaacttgatggcacaagttacattgaatgccct
cttcgtgaacgattgtcccatcttgaggaaattcttgaccccgaccaacaacgaattgca
cgagcagaacatcttcagaccaattcggtcgaacaagcgcaaaacttctatgagaatgtt
cttagtgctggacatgagggagtcatggcaaaaaacttagatgcaacataccaaccggga
tctcgagttggatatcaacagaaaattaaaccaaccatggaaccgcttgatctcgttgtt
acccgagctaagtggagtgaaggtcgaattagtgactttctcggccgtccgtatcttgcg
tgccggaataataatggattcagcgaggtgggacgaatgcacactggatttactgatgca
caacttgaggaatttatggacttggttgaaccgctaattcgggaagttgatggtagagaa
gcgaaactcaagcctgaagttgtacttgaagtagaatatgaagagattcagaaatcgccg
cagtatgattctggatatgcactgcggtttcctcgactcaagcgcatccggcacgactta
gatcccgacgacactgacacaattgatagagtcaaggagctatatcaacaacaaagctga

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