Staphylococcus aureus subsp. aureus JH9 (MRSA/VISA): SaurJH9_1616
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Entry
SaurJH9_1616 CDS
T00522
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
saj
Staphylococcus aureus subsp. aureus JH9 (MRSA/VISA)
Brite
KEGG Orthology (KO) [BR:
saj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saj03019
]
SaurJH9_1616
03009 Ribosome biogenesis [BR:
saj03009
]
SaurJH9_1616
Enzymes [BR:
saj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SaurJH9_1616
Messenger RNA biogenesis [BR:
saj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SaurJH9_1616
Ribosome biogenesis [BR:
saj03009
]
Prokaryotic type
rRNA helicases
SaurJH9_1616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABQ49409
LinkDB
All DBs
Position
complement(1716790..1718136)
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AA seq
448 aa
AA seq
DB search
MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLL
PLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRC
NAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNAN
IAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI
LNPYLCIIFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIED
RGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKNKVRSKIKNKVKPGYKKKFKQ
EVEKMKRQERKQFSKQQNRQKRKQNKKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatccattcgaacaatttaatctagaatctagtttaattgacgctgtgaaa
gaccttaattttgaaaaaccaactgaaattcagaatcgaattattccaagaatactaaag
agaacaaatttaattggtcaatctcaaacgggtacagggaaatctcatgcatttttatta
ccattaatgcagttaattgatagtgaaataaaagaaccacaagcaatcgtagttgcacca
acaagagaacttgcacaacaactatacgatgcagcgaaccatttaagccaatttaaagct
ggtgtttcagttaaagtttttattggtggtacagatatagagaaagatagacaacgttgt
aatgcacaaccacaattgattataggcacccctactagaattaatgacttagctaaaacg
ggacatttacatgtgcacttagcatcatatttagttattgatgaagcggatcttatgatt
gacttaggattaattgaagatgtagattacattgctgcaagattggaagataatgcaaat
attgcggtgtttagtgctacaattccacaacagttacaaccatttttaaataaatattta
agtcatccagaatatgtagctgtcgacagtaaaaaacaaaataaaaagaacatcgaattc
tttttaatacctactaaaggtgcagctaaagttgaaaaaactttaaatttaattgatata
ctaaatccatacttatgtattattttctgtaatagtagagataatgcaaatgatttagca
cgttcactaaatgaagctggtattaaagttggtatgattcatggtggtttaacgccacgt
gaacgtaaacaacaaatgaaacgtatacgtaatttagaattccaatacgttattgccagc
gatttagcatctcgtggtattgatattgaaggtgttagtcatgtcatcaattttgatgtg
ccaaatgatattgacttctttacgcatagagttggacgaactggtcgtgggaattataaa
ggtgtagcaattacgctttatagtcctgatgaagaacacaatatttcattaatagaagat
cgcggttttgtattcaatactgttgatattaaagatggtgagttaaaagaagttaaagcg
cacaatcagcgtcaagcaagaatgcgcaaagatgaccatttaactaatcaagtgaagaac
aaagttcgaagtaaaattaaaaacaaagttaaaccaggttataagaagaaatttaaacaa
gaagttgaaaaaatgaaacgtcaagagcgtaaacaatttagtaagcagcaaaatagacaa
aaacgtaagcaaaacaaaaaaggttag
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