Salinibacterium sp. UTAS2018: ESZ53_00870
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Entry
ESZ53_00870 CDS
T05816
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sala
Salinibacterium sp. UTAS2018
Pathway
sala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESZ53_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sala03021
]
ESZ53_00870
03019 Messenger RNA biogenesis [BR:
sala03019
]
ESZ53_00870
Transcription machinery [BR:
sala03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ESZ53_00870
Messenger RNA biogenesis [BR:
sala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ESZ53_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QAV69118
UniProt:
A0A410YF71
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All DBs
Position
complement(178286..180601)
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AA seq
771 aa
AA seq
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MTDVNNHASSVDSRAALSALRLPELQAMAAERGITGTSKLRKGDLVDAINEKNNSNKDSA
PATEAVAAPARKRASRRVTSTDGAAIAGSEAPAGAPKVDKNASSSNDVAAQAPAADAAAE
KPKTASRKKKVDSAPAAESTAAAGSAASTDAAASSDAPAAEAAPKRSRRSSSRSVAAADA
SSDASVASTGDDAVASDAKAADSEGKAAKSGNRNNRGDKGAKSADNNSDNADKSNNADKS
NNADTNNGDKNSNADKNNNADKNSDKNNSNDSDNDGDNADNESGSGRGRNRNRNRNSQNG
EGSGRQNNNRRQNNNGEGNNGDSNRNGGDSNRSNRNNGDGNNNSRSNDDSRGGDVDSERG
GRGRYRDRKRGRGNMGDDFEPEITDDDVLIPVAGILDVLDNYAFVRTTGYLPGNSDVYVS
LGQVKKYNLRKGDAVVGAIRQPREGDNNQGRQKYNAIVRIDSINGLPVEEAANRVEFGKL
TPLYPQERLRLETEPTMLSTRIIDLAAPIGKGQRGLIVSPPKAGKTQVLQAIANAISKNN
PEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGHD
VVVLLDSITRLGRAYNVTAPPSGRVLSGGVDSAALYPPKRFFGAARNVEEGGSLTIIATA
LVETGSKMDEVIFEEFKGTGNMELRLSRQLADKRIFPAVDVNASGTRREEMLLGADEVKV
TWNLRRALAGLDQQAALEIVLNKLKETQSNVEFLMQIQKSLPSTTGNKKEV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacgtcaacaaccacgcatcaagcgtggattcccgtgccgcgctgagcgcgtta
cgactgcccgagcttcaagcaatggcggccgaacgcggcatcaccggtacttccaaactt
cgcaaaggagatctcgtggacgcaattaacgagaagaacaacagcaacaaagactctgct
cccgccaccgaagcggttgccgctccggcacgcaagcgtgcttcacgccgcgtgacgagc
actgatggtgccgctatcgccggctccgaggctcccgcaggcgctccgaaagtagacaag
aacgcgtcgtcgtcgaacgacgtcgcagctcaggcccctgccgcggatgccgcagcagag
aagcccaagacggctagccgcaagaagaaggttgactccgcgcccgccgccgagtcgact
gccgccgccggctcagcagcgtcgaccgacgccgcagcatccagcgacgctcccgccgca
gaggccgcgcccaagcgcagccgtcgcagctccagccgtagcgttgccgcagcagacgcg
tcgagcgacgccagcgtcgcatcgaccggcgacgacgccgtagcgagcgacgctaaagcc
gccgacagcgagggcaaggctgccaagagtggcaaccgcaacaacagaggtgacaagggc
gcgaagagcgccgacaacaactctgacaacgcggacaagagcaacaacgccgataagagc
aacaacgccgataccaacaacggcgacaagaacagcaacgctgacaagaacaacaacgct
gacaagaacagcgacaagaacaacagcaacgacagcgacaacgacggcgacaacgccgac
aacgagtcgggttcgggccgcgggcgtaaccgtaaccgcaaccgcaacagccaaaacggt
gaaggttctggtcgccagaacaacaaccgtcgccagaacaacaatggcgagggcaacaac
ggcgacagcaaccgcaacggcggcgacagcaaccgcagcaaccgcaacaacggcgacggc
aacaacaacagccgcagcaatgatgactcgcgcggcggcgacgttgactccgagcgcggt
ggacgtggccgttaccgtgaccgcaagcgcggccgtggaaacatgggcgacgacttcgag
cccgagatcaccgacgatgacgtactgatcccggtcgccggcatcctcgacgttctcgac
aactacgctttcgttcgcaccactggttaccttccgggtaacagcgacgtgtacgtttcg
cttggtcaggtcaagaagtacaacctccgcaagggtgacgccgttgttggcgccattcgc
cagccgcgtgagggtgacaacaatcagggccgccagaagtacaacgccatcgtgcgcatc
gactcgatcaacgggctccccgttgaagaggcagcaaaccgcgtcgaattcggcaagctc
accccgctgtacccgcaggagcgtctgcgtctcgagaccgagccgaccatgttgtcgact
cgcatcatcgatcttgccgctccgatcggaaagggccagcgcggcttgatcgtctcgcct
ccgaaggctggcaagactcaggttctgcaggccatcgcgaacgcgatctccaagaacaac
cccgaggttcacctcatggtcgttcttgtggacgaacgtcccgaagaggtcaccgacatg
cagcgcaccgtcaagggcgaagttattgcttcgaccttcgaccgccccgctgaagaccac
accacggttgctgaactcgccatcgagcgtgccaagcgtctcgtcgagctcggccacgac
gtcgttgtgctgcttgactcgattactcgccttggccgtgcgtacaacgtgacggcaccg
ccgtcgggacgcgtactttcgggtggcgtcgactcggcagcgctgtacccgccgaagcgc
ttcttcggtgcggctcgcaacgttgaagagggcggctcgctcaccatcatcgctaccgcg
ctcgtagagaccggttccaagatggacgaggttatcttcgaagagttcaagggcaccggc
aacatggagcttcgtctctcacgccagctcgctgacaagcgcatcttccccgcggtcgat
gtcaacgcatccggaacgcgtcgcgaagaaatgctgctcggcgccgacgaagtcaaggtc
acctggaacttgcgccgtgcgctcgcggggctcgaccagcaggctgctctcgagatcgtg
ttgaataagctgaaggagacgcagtcgaacgttgagttcctcatgcagatccagaagtcg
cttccttccactaccggcaacaaaaaagaggtctaa
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