Salinibacterium hongtaonis: C2138_05990
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Entry
C2138_05990 CDS
T05414
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
salc
Salinibacterium hongtaonis
Brite
KEGG Orthology (KO) [BR:
salc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salc03019
]
C2138_05990
Enzymes [BR:
salc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C2138_05990
Messenger RNA biogenesis [BR:
salc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2138_05990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
AAA_30
MTR4_beta-barrel
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AWB89147
LinkDB
All DBs
Position
complement(1229131..1231587)
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AA seq
818 aa
AA seq
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MIDPGSPGLSPAERYAASRLRESAPHLDAFREGLAFDMDPFQLEAAAALERGESVLVAAP
TGAGKTIVAEYAVYLAMQRPRAKVFYTAPMKALSNQKFQEFVAAYGADNVGLLTGDTNIN
SGARIVVMTTEVLRNMLYADSDLLRDLDFVVMDEVHYLADRFRGAVWEEVIIHLPRNVRL
VSLSATVSNAEEFGDWLQAVRGDTAVIVSEERPVPLDQHVLVRSKLLDLFDSSGQAATHR
VNPELMRLASSGGRGGRPPERGRARGRDRNRYHARAAFNDDKLNRAEIVRLLGSQNLLPA
IFFIFSRVGCDQAVAQVLRAGVHLTEKHERDVIREIVEERCRAIPDEDLAVLGYWQWLDG
LERGVAAHHAGMLPAFKEVVEELFQKKLVKAVFATETLALGINMPARTVVLEKLEKFNGE
ARVPITPGEYTQLTGRAGRRGIDVEGHSVIQWQNGIDPQAVASLASRRTYPLNSSFAPTY
NMAVNLIEQFGRERTRDVLESSFAQFQADRSVVDMARKVRSQEESLAGYAKAMECHLGDF
AEYASIRRELGDLERKTVRSDAGSRGERDRRQRQLTELRKRLKQHPCHSCAEREAHARWA
ERWWRLKKQTDELRRQVKTRTGAVAKVFDRVTDVLLELGYLTRNEHGAVVVAEGGRILKR
IYGERDLLVAECLRRGLWNDLDVAGMAAMAAAIVYEPRRDDGQGDERSLPKGSFRAALDN
TTTLWANLDDVERDHRLPGTNPVSPGLSMAMYRWAQGAALDSVLMDAELAAGDFVRMTKQ
TIDLLDQLSMVADAPVGPTARKALESIRRGIVAYSSVG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacccaggatccccggggttgtccccggctgaacgctatgcggcctcccggctg
cgcgagtcggcaccgcacctcgacgcgttccgcgagggtctcgccttcgatatggacccg
ttccagctcgaagcggccgcagctctcgaacgcggcgaaagcgttctcgtcgccgcccct
acgggcgcaggcaagacgatcgtcgccgagtatgccgtctacctcgcaatgcagaggccg
cgggcaaaggtcttttatacggcgcccatgaaagccctgagcaaccaaaagtttcaggag
ttcgtcgcggcttacggtgctgacaatgtgggtcttctcacgggggacaccaacatcaac
tccggtgctcgcatcgtggtgatgacgaccgaggttctgcgcaatatgctctacgcggat
tccgatctgctgcgcgacctcgattttgtcgtgatggatgaggttcactatcttgccgac
cgctttcgcggggcagtgtgggaagaagtcatcatccatctgcctcgcaatgtgcgactc
gtctccctcagcgcaaccgtgtcgaacgccgaggagttcggcgattggcttcaggccgtg
cggggcgacaccgcggtgatcgtttcggaagagcgccctgtgcccctcgaccagcacgtt
cttgtgcggtccaagctgctcgatctcttcgactcctctggccaggcggccacccacagg
gtcaacccagagctcatgcgccttgcgtcatccggtggccgcggcggtcgtccgcctgag
cgcggcagggctcgcggtcgtgatcgcaaccgctaccacgcacgcgccgcattcaacgat
gacaagctcaatcgcgccgagatcgtgcgtctcctcgggtcgcagaatctcttgcccgct
atcttcttcatcttcagccgggtgggatgtgaccaggccgtcgctcaggttctgcgggcc
ggggtgcatctcaccgagaagcacgaacgcgacgtcatccgagagatcgttgaagaacgc
tgccgtgcgatccctgatgaagatctcgcggtgctgggttactggcagtggctggatggt
ctggagcgcggcgtcgcggcccaccacgcgggaatgctgccggcgttcaaagaggtcgtc
gaggagctgtttcaaaagaagctcgtcaaagccgtctttgccacagagactcttgcgctc
ggcatcaatatgccagcgcgcaccgtcgtgctggagaagctcgagaaattcaacggtgag
gcccgggtgcccatcacgccgggggagtacacccagctcaccggccgcgcgggccgtcgc
ggaatcgacgtcgagggccattctgttattcagtggcagaacggaatcgacccgcaggcc
gtggcctcccttgcctcgcgccgcacctacccgctcaactcgagcttcgctcccacgtac
aacatggccgtgaacctcatcgagcagttcgggcgggaacgcacgcgagacgtgctcgaa
tcgtcattcgcccagtttcaggctgaccgttccgttgtcgacatggcccgcaaggtgcgc
agccaagaggagtcactcgcgggctacgccaaggcaatggaatgccacctgggcgacttt
gccgagtatgcaagcatccgccgtgagctcggtgacctcgaacgcaagaccgttcgcagc
gacgcgggctcccggggagaacgtgatcgtcggcagcgccagctcacagagctgcgcaaa
cgactcaagcaacatccgtgccacagctgcgccgaaagagaggctcacgcgcgctgggca
gagcgctggtggcggctcaagaagcagacggatgagctgcgtcgccaggttaagacccgc
acgggtgccgttgccaaggtgttcgaccgggtcaccgatgtgctgctcgaactcggctat
ctcactcgcaatgaacacggagcagtggtcgttgccgagggcggtcgcatcctcaaacgc
atctacggggagcgtgaccttcttgtagcggaatgccttcgccgagggctatggaacgat
ctcgatgtcgctggcatggcggcgatggcggcagcgattgtttacgagccgcgccgggac
gatggtcagggggatgagcgttccctgcccaagggctcgttccgtgcagcactcgacaac
acgaccaccctctgggccaacctcgacgacgtcgagcgcgaccaccgtttgcccggcacc
aatcccgtatctccggggctgtcgatggccatgtaccgctgggctcagggcgctgcgctg
gattctgtcttgatggatgccgagctcgccgctggcgacttcgtgcgcatgactaagcag
accatcgacctgctcgaccagctctccatggttgccgatgcgccggttggcccgacggcc
cgcaaggcgctcgaatccattcgccgcggcattgtcgcctactcgagcgtgggctaa
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