Salicibibacter halophilus: EPH95_12275
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Entry
EPH95_12275 CDS
T06083
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sale
Salicibibacter halophilus
Pathway
sale03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EPH95_12275 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_12275 (uvrB)
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EPH95_12275 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EPH95_12275 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
Kinesin
AAA_7
AAA
AAA_22
Microtub_bd
HEM4
TrwB_AAD_bind
HerA_C
AAA_16
AAA_5
DUF87
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QDI91856
UniProt:
A0A514LJ24
LinkDB
All DBs
Position
2522691..2524673
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AA seq
660 aa
AA seq
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MTQTFSLESAYQPEGDQPEAIKKITEGIKAGDKHQVLLGATGTGKTFTMSNVIREVNKPT
LVMAHNKTLAGQLYSEFKSLFPNNAVEYFVSYYDYYQPEAYVPQSDTFIEKDASINDEID
KLRHSATSALFERNDVIIIASVSCIYGLGSPEEYRELVVSLRTGIEKGRDELLNDLVDVQ
YDRNDINFTRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRMTEVDALTGEVLGERNH
VAIFPASHFVTREQKMKKAIVNIEQELAERLQEFKNQDKLLEAQRLEQRTRYDIEMMQEM
GFCSGIENYSRHLTFREPGEAPFTLLDYFPDDFLMIIDESHATLPQVRGMYNGDRARKQV
LVDHGFRLPSAMDNRPLKFEEFEKRVSQAVYVSATPGPYEQEKAPEVVEQIIRPTGLLDP
KVNVRPIEGQIDDLIGEINERQEKNERVLVTTLTKKMAEDLTDYLKEVGIKVKYLHSDIK
TLDRLEIVRQLRLGEFDCIVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTMGR
AARHADGQVIMYADKETRSMEVAIKETERRRSIQEAHNEKHGIIPKTIEKAVPQTIQATV
AAEDKESYATPQDKHMTKDEKARLIEKIESEMKEAAKSLDFERAAELRDTMIELKGKKTS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
ttgacacaaacgttttcacttgaatctgcttatcaacccgaaggagatcaacctgaagcg
ataaaaaaaattacggaaggaataaaagcgggcgataaacaccaagtgttgttgggagca
accggaaccggcaaaacatttacgatgtcaaacgtgatccgggaagtcaacaaaccgacg
cttgtcatggctcacaataaaacgctcgccggccaattatacagtgaatttaaatcattg
tttcccaataatgccgtagagtacttcgtcagttattacgattactatcaaccggaagca
tatgtcccgcagtcggatacatttattgaaaaagacgccagcatcaatgatgaaatagac
aaactccggcactccgcgacgagcgcgttatttgaacgcaatgatgtcatcatcatcgcc
agcgtctcatgtatctatgggctggggtcgccggaagaataccgcgagttggtggtttca
cttcgtaccgggatcgaaaaaggaagagatgaacttttaaatgatctcgtcgatgtgcaa
tatgaccgtaacgacattaattttacgagagggactttccgtgtgcgcggggatgttgtg
gaaatttttcctgcttcccgggatgaacactgcattcgcgtggaatttttcggcgacgag
attgatcgcatgaccgaagtggacgcattaacaggagaagtgcttggtgaacgcaaccat
gttgcgattttcccggcttcccacttcgttacgcgcgaacaaaaaatgaaaaaagcaatc
gtcaatattgaacaagagctggctgaacgcctccaagaatttaaaaaccaggacaagttg
ttggaagcgcagcggctggaacagcggacccgttatgacattgaaatgatgcaggaaatg
ggcttttgctccggaatcgaaaactattcccggcatttaacgtttcgcgaaccgggcgag
gcgccgtttacgttactggactattttccggacgattttcttatgattatcgacgaatcg
cacgcaacgttgccgcaagtaaggggaatgtacaatggggaccgtgcgcgaaaacaagtg
ttggtcgaccatggatttcggctgccttcagcgatggacaaccgtccgttgaaattcgag
gagtttgaaaagcgagtgtcacaagcagtgtatgtatccgcgacccctggaccttatgag
caagagaaagcgccggaggttgtcgaacagattatccgcccgaccggattgcttgaccct
aaagtgaacgtgcggccaatcgaagggcagatcgatgatttaatcggggagattaacgaa
cggcaggaaaaaaatgaacgtgtgttagtgacgacgcttacgaagaaaatggcggaagat
ctgacggactatttaaaagaagtcggcattaaagtaaaatatttacactccgatattaaa
acgctggaccgtttggagatcgttcgccagctgcgtcttggcgagtttgactgtattgtc
ggcatcaatcttttgcgtgaagggttggatatccccgaagtttccctcgtggcgattttg
gacgcggataaagaagggtttctgcgtgccgaacggtccttaatccaaacgatgggacgg
gcggcacgtcatgcagatggccaagtgatcatgtatgcggataaggaaacgcgctccatg
gaagtagcgataaaagagacggaaaggcgccgaagtattcaagaagcacataatgaaaaa
catgggattataccgaaaacaattgaaaaagccgtgccgcagacgattcaggctacggtt
gccgcagaagataaagaaagctatgcaacgccgcaagataagcatatgacgaaagatgaa
aaggctcgtctcattgaaaaaattgaatcggaaatgaaagaagcggcaaaatcgcttgat
ttcgaacgagccgcggagcttcgcgatacaatgattgagctgaagggaaagaaaacatca
tag
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