Shewanella algae: BS332_08135
Help
Entry
BS332_08135 CDS
T05622
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
salg
Shewanella algae
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salg02000
]
BS332_08135
Transporters [BR:
salg02000
]
Other transporters
Pores ion channels [TC:
1
]
BS332_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AXQ14264
LinkDB
All DBs
Position
1779955..1782069
Genome browser
AA seq
704 aa
AA seq
DB search
MSHIPVKLSALALALGCAMQANAASIERDPLVNNAMDVIVVHGERANATEVATTSWSISE
DEIKALGAQSLDEVLKNVPGVYVRYGGEGTPRVDIRGFKTRHVTLLVNGVPANSADDGQF
DPSVIPTSQISRVEVSVGPTSVLYGPGGAGGVINIITKRGDSAPAVSGNLELSKDDTFKG
DISAAGSGDNWQGLISAGYQHTDGFPMSSDYQVTEYQDKYQRNNTDKELTNLYAQGSYWL
SDNTQLIANMALRSGEWGKPPRDGSGSGRVKFERVDDYDSQTFQLGLAHKFNDTFTFRGF
GYHNQSDTYETVYGDNSYAELTQAQDGRSKVQGANLQLITDFDTAGILTTSVIAEKQSWE
AVAESLSSSKSGSSKVAAAKGSGGGTGSGGGNGSGGGTGSGGGNGSGGGTGSGGGNGSGG
GSGESFDDSAWVYTAAAEYQFQSEGDWGFTLGGTYHDMDKTEGNENDYSALASGFWQAAD
DTRLSLSVARKVRFPSMRNLYSLSSGNQELETEISKHVELGLEQGLGMNTELQLYLYHTD
ADDYIAKDASGMYQNMGNYRFQGLDTVLSNNSIENLDLSLSYSYLHAEDRDSSTGFDGLD
YRPKHQLRFQLGYKLPTETRIHLNVERIMDQNYYEQEKIGGQKVWQEKSLDDYTLVDINL
VQPLLKDKLELYLRATNLLDENYYQSDSLPQAGRQVFVGINWQI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatatcccggtaaaactctctgccctcgcactggcgttgggctgtgccatgcag
gccaatgcggcctctatcgaacgcgatccactggtcaacaatgcaatggacgtcatagtg
gtgcacggtgagcgtgccaacgccactgaagttgccactacaagttggagcatttccgaa
gatgaaatcaaggccttgggtgctcaaagcctggatgaagtgctgaaaaatgttcccggt
gtttacgtacgttacggcggcgagggtacgccaagggtggatatccgtggcttcaaaacc
cgccatgtgactctgttggtcaacggtgtaccggccaacagtgccgatgatggtcagttt
gatcccagcgtgatcccaaccagccagatttccagagtcgaagtctccgttggcccaact
tcagtactctatggcccaggcggcgctggtggtgttatcaacattatcaccaagcgtggc
gacagcgccccggctgtatccggtaacctggaattgtccaaggacgataccttcaagggt
gatatcagtgccgccggctcgggcgacaactggcagggactcatcagtgccggttatcag
cacactgatggtttccccatgtcttctgattatcaagttactgaatatcaagataaatat
cagcgcaacaacacagataaagagctgaccaatctgtacgcccaaggcagctattggctc
agtgacaatactcaactcattgccaatatggcgctgcgttcaggcgagtggggcaaacca
ccaagagatggcagcggcagcggccgggtgaaatttgagcgtgtcgatgactatgattca
cagactttccagctgggtctggcacataagttcaatgatactttcactttccggggtttt
ggttatcacaaccagagcgacacctatgaaactgtgtacggtgacaacagctacgctgag
ctgacccaggctcaggacggccgctccaaagtacagggggcaaacctgcagctgatcacc
gacttcgacactgcgggtatcctgaccacctctgtgattgctgaaaagcagagctgggaa
gcggtagccgaaagcttaagttcctccaagtccggcagcagcaaggttgcagcagccaag
ggctcaggtggtggtactggttcaggcggcggtaacggctcaggcggtggtactggttca
ggcggcggcaacggctctggcggtggtacaggttctgggggcggtaatggctcaggtggt
ggcagcggtgagtctttcgatgattcggcctgggtttatactgcggcggccgagtatcag
ttccagtcggaaggcgattggggctttactctgggcggcacttaccacgatatggacaag
accgaaggcaacgagaacgattactcggcgctggcctcaggtttctggcaagcggctgac
gatacccgcctgagcctgagtgtagctcggaaggtgcgtttcccatccatgcgcaacctg
tactccctgtcttcaggcaatcaggaactggagacggaaatctccaagcatgttgagttg
ggactggagcaaggcctgggtatgaataccgagctgcaactctatctctatcacacagat
gccgatgattacattgccaaagatgccagcggcatgtatcagaacatgggcaactatcgc
ttccagggtttggatactgtgctgtccaataacagcatagagaatctggatctgagcctg
agttacagctatctgcatgccgaagacagagacagcagcacaggttttgatggtctggac
tatcgtcccaagcaccagctgcgcttccaactgggttacaagctgcctaccgagacccga
atccacctgaatgtggaacgcatcatggatcagaactactacgagcaggagaagattggc
ggtcagaaggtgtggcaggagaaatcactggatgattacaccctggtagacatcaatctg
gtacagcctttgcttaaagataagctagagctctatttacgagccaccaacctgctggac
gagaactactatcagagcgattctctgcctcaggcaggtagacaagtctttgttgggatt
aactggcagatctga
DBGET
integrated database retrieval system
