Shewanella algae: BS332_21120
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Entry
BS332_21120 CDS
T05622
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
salg
Shewanella algae
Pathway
salg03030
DNA replication
salg03430
Mismatch repair
salg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BS332_21120
03430 Mismatch repair
BS332_21120
03440 Homologous recombination
BS332_21120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salg03032
]
BS332_21120
03400 DNA repair and recombination proteins [BR:
salg03400
]
BS332_21120
Enzymes [BR:
salg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BS332_21120
DNA replication proteins [BR:
salg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BS332_21120
DNA repair and recombination proteins [BR:
salg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BS332_21120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
AAA_5
RuvB_N
AAA_16
DNA_pol3_delta
AAA_14
AAA_19
ResIII
AAA_2
PIF1
TniB
AAA_18
AAA_7
AAA_assoc_2
TsaE
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXQ16346
LinkDB
All DBs
Position
complement(4658951..4661839)
Genome browser
AA seq
962 aa
AA seq
DB search
MSYQVLARKWRPASFDQVVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCETGITAKPCGQCSACQEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTQGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLDQ
TEMAGQLQHILQSEGLKFETSALTLLARAANGSMRDALSLTDQAIAFGAGQVMLEQVQTM
LGAIDERQVLALFDALLTGDIAKMMQEVAKVLAFGADAAEVLRSLLELLHQITLSQFAPA
AANLSLFGPRINHYGENLTPEQVQLYYQLLLSGRKELPYAPDPKSGLEMALLRAVAFVPE
TPPKRWQRGEVADLSALDDSSSAAAPATVGALNQPLASNNADEIKPQAASAQSVTSQVVK
AQAEKMQAAKMPTQVSPAAETQASNIDSQMAADEGEDADEQALLAEQALLLSQAGSMGFR
NEASEPAKVAESLPARQPTAAKPHEPVSQAETSTISDEQQSQDDFYAAMGYSLQGEGQDS
SLDFYQQQMSMDGQMPSAADKSTSEASLSNKPSSEPVPADANIDSGSDDILGDDLLDQVL
ATRDLLLSDIEAASPKDGEEKKPLLERRSAAAAPESDAVAATQSEAAAELGNSPELSKSP
ELSKSPERVDSLEPSNSPEPSQAETQTPVAGEVPSKSGPNYVAALKEDRPPWEDAPEGAV
AAGREAMQDSETVQNVAFPQAESESVPEFLPEPEPEPQHTAQQTAQEAAPQEIDEPGHEL
KNELGQGSGQSATVNTVNTGARPASEPCQALGPESAEAFAHAPPSGHPQDLYWYKLMSAL
EIGGRVRQLAVNSVCERIAEPLPLLLKPDQKHLAADSAIKQLEEALSKLFGKPCRTEIVV
GVDDQRETPLEIRHRFHQELLSGAHASLMNDENIQWLVSHMGAELDQDTLGYPPSCSVNG
LI
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaggtactagccagaaaatggcgacctgccagttttgatcaggtagtcggc
caatctcatgtcttgcatgcattgaccaatgccctgagtcagcaacgactgcaccatgcc
tatctgtttaccggtacccgcggcgtcggcaagaccagtttggcgcgcctgtttgccaaa
gggctcaactgcgaaacagggatcaccgctaagccatgtggccaatgcagtgcctgtcag
gaaattgcccaggggcgttttgtcgaccttatcgaagtcgatgcggcttcccgtaccaag
gtagatgatacccgcgaactgctggataatgttcagtatcgcccaacccagggacgtttc
aaggtttacctgatagacgaagttcatatgctgtcccgcagcagtttcaatgcgctgctt
aagacactggaagaacccccagagcacgtcaaattcctgctggccaccacagatccgcaa
aagctgccggtgacagtactgtcccgctgcctgcaatttaacctaaagagtctggatcag
acggagatggccggccagttgcagcatattttgcaaagcgaaggtcttaagtttgaaact
tctgcgctgacgcttctggcgcgagccgccaacggcagtatgcgagatgccctgagcctg
acagatcaggctatcgcctttggagccgggcaagtgatgctggagcaggtacaaaccatg
ctcggcgccatagatgagcgccaggtgctggcgctgtttgatgcgctcctcacaggcgac
atcgccaaaatgatgcaggaagtggccaaggtgctggcatttggcgccgatgctgccgaa
gtgctgcgtagcttgctggagctcttgcatcagataaccctgagtcagtttgcgccggcg
gcggccaatctgtcgctgtttggtcccagaattaaccactatggtgaaaacctcaccccc
gagcaggtgcagctctattaccagttgctgctcagcggtcgcaaggagctgccttatgca
ccggatcccaagtcagggctggagatggcgttactcagagccgttgcctttgtgccggaa
acgccgcccaaacgctggcaaaggggtgaagtcgccgatctgtctgccttggatgacagc
agcagtgccgctgcgcctgcgacggtcggggcgctgaatcaacccctggcaagcaataac
gccgatgagataaaacctcaagccgcctctgctcaatctgttacaagccaggttgttaaa
gcgcaagccgaaaagatgcaagctgccaagatgccaacacaggtaagcccggcggctgag
acgcaggcgagcaatattgactcacagatggctgccgatgagggcgaagatgcagacgaa
caggccttattggccgaacaagcgctgctgttatcccaggccggtagcatggggttccgg
aatgaggcctctgagcctgctaaagtggccgagtctctgccggcacggcaaccgactgca
gctaagcctcacgagcccgtgtcacaagctgaaacctcgactattagtgatgagcagcaa
tcccaggatgacttctatgctgccatgggctattcactgcaaggtgaagggcaggatagc
agcctggatttttatcagcagcagatgtcgatggacggccaaatgccatccgctgctgac
aagagtacctccgaggcatcgctatcaaataagccatcaagcgagccagtgcctgccgat
gccaacatagactcgggcagcgatgacatcttgggtgatgatctgctcgatcaggtgctt
gccacccgggatttgctgctcagtgatatagaggccgccagccccaaggacggtgaagaa
aaaaagcctttgctggagcgccgcagcgcggccgcagcacctgagtccgatgctgtagcg
gccactcagtcagaagcggcagcagagctaggaaacagccctgagctgagcaaaagccct
gagctgagcaaaagccctgagcgggtagacagccttgaaccaagcaatagccctgagcct
tcccaagcagaaacacaaactcctgttgccggggaggtgccctccaaatctggcccaaat
tatgttgcggcgctcaaggaggacaggccaccatgggaagatgccccagagggtgcggtt
gcagcgggtcgcgaggcaatgcaagacagtgaaacggttcaaaacgtggctttcccacaa
gccgaatcagagtctgtgcctgagtttttgcctgagcctgaacctgagccacaacatacc
gcgcagcagacagcacaggaagctgcaccacaggagatagacgagccgggacatgagctg
aaaaatgagcttgggcagggatctggccaaagcgctacagtaaacactgtaaacacaggg
gctcggcctgcatccgagccgtgtcaagcattaggcccggagtccgccgaggccttcgcc
catgctccgcccagtggtcatccacaggatctctattggtataaattgatgtcggcgctg
gaaatcggcggccgggttcggcaactggcggtgaactcagtctgtgagcggatagctgaa
ccgctgcccttgctgctcaagccggatcagaagcacttggcggcagattcggccatcaaa
cagctcgaagaggcgctttccaaactgtttgggaaaccttgccgcacagagattgtcgta
ggagtagatgaccaaagggaaacgccgttggaaattcgtcatcgttttcatcaggaactc
ctgagcggggctcatgcttcattgatgaatgatgaaaacattcaatggcttgtcagtcat
atgggggccgaactggatcaggatactctagggtatcccccgagctgctcagtcaacggg
ctaatttga
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