Streptomyces albireticuli: SMD11_5562
Help
Entry
SMD11_5562 CDS
T05230
Symbol
rsmB
Name
(GenBank) rRNA cytosine-C5-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
salj
Streptomyces albireticuli
Brite
KEGG Orthology (KO) [BR:
salj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
salj03009
]
SMD11_5562 (rsmB)
Enzymes [BR:
salj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SMD11_5562 (rsmB)
Ribosome biogenesis [BR:
salj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SMD11_5562 (rsmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Motif
Other DBs
NCBI-ProteinID:
ARZ71141
UniProt:
A0A1Z2LA78
LinkDB
All DBs
Position
6307564..6308928
Genome browser
AA seq
454 aa
AA seq
DB search
MRILAFEALRAVDERDAYANLVLPPLLRKAREQEGFEARDAALATELVYGTLRRQGTYDA
IIASCVDRPLREVDPPVLDVLSLGAHQLLGTRIPPHAAVSASVELARVVLGDGRAKFVNA
VLRKITAHDLDGWLERVAPPYEDDPEEHLAVVHSHPRWIVSALWDALGGGRAGIEDLLDA
DNERPEVTLVARPGRATTEELLAAVGEDSALPGRWSPHAVRLAEGGEPGALEAVREGRAG
VQDEGSQLVALALAAVPVEGPDTRWLDGCAGPGGKAALLGALAAGRGAALLASEKQPHRA
RLVERALAGNPGPYQVIAADGTRPPWREGTFDRVLMDVPCTGLGALRRRPEARWRRRPED
LAGFAPLQRDLLREALRAVRVGGVVGYATCSPHPAETKAVVTDVLKRDGVSAEWIDARPY
MQGVPALGDGPDVQLWPHLHGTDAMYLALLRRTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcctcgccttcgaggcgctgcgggccgtcgacgagcgcgacgcctacgcgaac
ctggtgctgcccccgctgctgcgcaaggcccgtgagcaggagggcttcgaggcgcgcgac
gccgccctcgccaccgagctcgtctacggcacgctgcgccgccaggggacgtacgacgcg
atcatcgcgtcctgcgtcgaccggccgctgcgcgaggtcgacccgccggtgctggacgtc
ctgagcctgggcgcgcaccagctgctcggcacccgcatcccgccgcacgcggcggtgtcc
gccagtgtcgagctggcgcgggtcgtgctgggtgacggccgcgcgaagttcgtcaacgcg
gtgctgcgcaagatcacggcgcacgacctggacggctggctggagcgggtcgccccgccg
tacgaggacgaccccgaggagcacctcgccgtcgtccactcccacccgcgctggatcgtc
tccgccctgtgggacgcgctcggcggcggccgggccggcatcgaggacctgctggacgcc
gacaacgaacggcccgaggtcacgctcgtcgcccgccccgggcgcgccacgaccgaggag
ctgctggccgcggtcggcgaggactccgcgctgcccggccgctggtcgccgcacgccgtg
cggctcgccgagggcggcgagcccggcgcgctggaggccgtgcgcgagggccgggccggc
gtccaggacgagggcagccagctggtcgcgctcgccctcgcggccgtgcccgtggagggg
ccggacacgcgctggctggacggctgcgcgggccccggcggcaaggcggcgctgctcggc
gcgctcgcggccgggcgcggtgccgcgctgctggcctccgagaagcagccgcaccgcgcc
cggctggtcgagcgcgcgctggccggcaaccccggcccgtaccaggtgatcgccgccgac
ggcacgcgcccgccgtggcgcgagggcaccttcgaccgggtcctgatggacgtgccctgc
accggtctgggcgccctgcgccgccgtcccgaggcgcgctggcgccgccgccccgaggac
ctggcgggcttcgcgccgctccagcgcgacctgctgcgggaggcgctgcgggccgtgcgg
gtcgggggcgtcgtcggttacgccacgtgctcgccgcacccggcggagaccaaggccgtc
gtgacggacgtcctcaagcgggacggcgtgagcgcggagtggatcgacgcgcgcccgtac
atgcagggggtcccggcgctcggggacggccccgacgtgcagctgtggccgcatctgcac
ggcacggacgcgatgtacctggccctgctgcgccgcacggcgtag
DBGET
integrated database retrieval system