Salinimonas sediminis: D0Y50_04195
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Entry
D0Y50_04195 CDS
T05624
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
salm
Salinimonas sediminis
Pathway
salm00521
Streptomycin biosynthesis
salm00523
Polyketide sugar unit biosynthesis
salm00541
O-Antigen nucleotide sugar biosynthesis
salm01100
Metabolic pathways
salm01110
Biosynthesis of secondary metabolites
salm01250
Biosynthesis of nucleotide sugars
Module
salm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
salm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D0Y50_04195 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D0Y50_04195 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D0Y50_04195 (rfbC)
Enzymes [BR:
salm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D0Y50_04195 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXR05642
UniProt:
A0A346NJD5
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Position
complement(930032..930577)
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AA seq
181 aa
AA seq
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MQCITTSIDDVKIIEPKVFGDERGYFMESFRDNWFRENCADVTFVQDNRSRSKQGILRGM
HYQLSQTQGKLVSVTDGAVFDVAVDMRKHSKTYGQWVGALLSAQNKRMLWVPAGFAHGFY
VTSESAEFSYKCTDYYHPESEVSLAWDDPTVGIDWPLVNDLAPSLSAKDQQGLAFADAPS
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtattactacttctatcgatgatgtcaaaatcattgagcctaaagtattcggc
gatgaacgcggctactttatggaatcattcagagacaactggtttcgggaaaattgtgca
gacgttacgtttgtacaggataaccgaagccgctcaaagcaggggatattacgtggcatg
cactaccagctcagccaaacccagggcaagctggtgtcggtaaccgatggcgctgtgttc
gatgttgcggtggatatgcgaaagcattccaagacctacggccagtgggttggcgccctt
cttagcgcccagaacaagcggatgttgtgggtgcccgcagggttcgcgcatggtttctat
gttacaagcgaatcggctgaatttagctataaatgtaccgactattatcatcctgaatca
gaagtgtcattagcctgggacgaccctactgtagggattgactggccactggttaacgac
ctggcaccgagtttgtcagctaaagaccagcaaggcctggcctttgctgatgccccctca
ttctag
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