Silicimonas algicola: EF888_04955
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Entry
EF888_04955 CDS
T05779
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
salo
Silicimonas algicola
Pathway
salo00521
Streptomycin biosynthesis
salo00523
Polyketide sugar unit biosynthesis
salo00541
O-Antigen nucleotide sugar biosynthesis
salo01100
Metabolic pathways
salo01110
Biosynthesis of secondary metabolites
salo01250
Biosynthesis of nucleotide sugars
Module
salo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EF888_04955 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EF888_04955 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EF888_04955 (rfbC)
Enzymes [BR:
salo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EF888_04955 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF3319
Motif
Other DBs
NCBI-ProteinID:
AZQ66545
UniProt:
A0A316GG16
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All DBs
Position
complement(978872..979429)
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AA seq
185 aa
AA seq
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MIVSETALPGALVIEPARHGDHRGFFSESWSRRRMEEAGIDLDFVQDNHSLSTEVCTLRG
LHYQAPPHAQAKLVRCGRGSLTDVIVDVRNGSPTYGQSLSVDLSFDNGRQVLVPIGFLHG
FITREPNTEIVYKVSDYYSADCDGAVRWDSCGIDWSCDTDPIISPKDAEAVPFSDWQSPF
EWTGA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcagtgaaacagcccttcccggcgccctggtcatcgagccggcacgacacgga
gaccaccggggctttttctcggaatcctggagccgccgccgcatggaagaggccgggatc
gacctcgacttcgtgcaggacaatcattccctttcgaccgaggtctgcaccctgcgcggc
ttgcactaccaggccccgccccacgctcaggcaaagctggtgcgctgcgggcgcggatcg
ctgaccgacgtgatcgttgacgtgcgtaacggctcaccgacctacggacagtctctgtct
gtcgacctcagcttcgacaacgggcggcaagttcttgtcccgattggatttctgcacgga
ttcatcacgcgcgagccgaataccgagatcgtctacaaggtaagcgattactattccgcc
gactgcgacggcgcagtccggtgggactcctgcggcatcgactggtcctgcgacaccgac
ccgatcatctcgcccaaagacgccgaagctgtgcccttctcggactggcaaagccccttc
gagtggaccggcgcatga
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