Silicimonas algicola: EF888_13885
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Entry
EF888_13885 CDS
T05779
Name
(GenBank) ROK family transcriptional regulator
Organism
salo
Silicimonas algicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR_2
HTH_IclR
HTH_AsnC-type
HTH_20
HTH_3
DprA_WH
HTH_5
HTH_Crp_2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AZQ68128
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Position
complement(2816590..2817846)
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AA seq
418 aa
AA seq
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MGPTPAAAIQRSDDLRRQNKRRILAALRVQRALARTELAAATGLSASTVSAATSELIATG
HLVEADLTPAPDDDTARSAGGRGRPRVALSRRPGAASVAALTITVNAIQVDLVDFAGDTI
CTRSEPSRTGSLAQADFASRISSLVETALAAAPKGTGPLSSVAVAVQGVVDAEGEVLHWS
PMSPHRNVGLAAELSRTLGAEVRLANDADMIAAALHHDEPERFGGDFAAILLSYGVGMGM
FLGGTLFHGARTSAAEIGHVPFEAGGALCRCGRFGCVEAYASEYGIWRAATGADPRVVPA
EPPDRAAMAGIAARAAAGDACAIEAYRTAGRALGHAVLTLYTVFDPVTVAFVGSGALAFD
LWEPVVREALCGPSTGLPYEGALFYGYPENIGLMSRGAVITALSNLDRTIDVDRLQSG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgggaccgacgccagccgccgcgattcagcgttccgacgacctgcgtcgccagaacaag
cgtcgcatccttgcggccttgcgggtccagcgtgcgctcgcccggaccgaactggctgcg
gcgacagggctcagcgcctcgacggtcagcgccgccacgtccgagttgatcgcgaccgga
catctcgtcgaagccgaccttacgcccgcgcccgatgacgatacggcacggtcggccggg
ggcaggggtcgtccgcgcgtcgcgctgtcgcgccggccgggcgccgcctcggtcgcggcg
ctgaccatcacggtgaacgccatccaggtcgacctcgtggacttcgccggcgacacgatc
tgcacgcgctcggagccctcgcgcacgggaagcctcgcgcaggccgatttcgcctcgaga
atttcctccctcgtcgagacggcgctcgccgcagcgccgaaaggcacagggcccctgtcg
tcggtcgccgtagccgtgcagggggtcgtcgacgcagagggcgaggtgctgcactggtcg
cccatgtctccgcaccggaacgtggggctggccgccgaactgtcgcggacgctcggagcc
gaggtgcggctcgccaacgacgccgacatgatcgcggcggcgctgcaccacgacgagccc
gagcgtttcggcggggatttcgccgcgatccttctgtcctacggcgtcggcatgggcatg
ttccttggcggcacgctttttcacggtgcgcgcacctcggcggcagagatcgggcatgtg
cccttcgaggcgggcggcgcgctgtgccgctgcggccgcttcggctgcgtcgaggcctat
gccagcgaatacggcatctggcgcgccgcgacgggcgcggacccccgcgtcgtgccggcc
gagccgcccgaccgcgcggcgatggcgggcatcgcggcgcgtgcggcagcgggtgacgcc
tgcgccatcgaggcctaccggacggcgggccgggccctcggacatgccgtcctgacgctc
tacaccgtgttcgaccccgtgaccgtcgccttcgtcggctcgggcgcgctggccttcgat
ctgtgggagccggtggtgcgcgaggcgctctgcggtcccagcacgggcctgccctacgag
ggggcgctgttctacggctatcccgagaacatcggcctgatgagccggggcgccgtcatc
acggcgctttccaacctcgacagaaccatcgacgtcgaccggcttcagtcaggctga
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