Salvelinus sp. IW2-2015 (Arctic char): 111950859
Help
Entry
111950859 CDS
T05762
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111950859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111950859
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111950859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
111950859
NCBI-ProteinID:
XP_023824544
LinkDB
All DBs
Position
LG23:18231430..18241183
Genome browser
AA seq
1167 aa
AA seq
DB search
MSPREKRFIAFSSIVIFCLLVYYIPTFFYIAFILGVCCVACIYHSGESLNARLGPHPRHG
LTIPPVLRRWLPEIANGLPTAGRVRSRTVKGDVREPLVLTDQRRSESAIYRKVAGHSDSF
LFSPRDILMGSYIGKAESPPSVVGRPRAGANSRVHPNAREQLREILARPNHAVYTPNKRL
SFGREPLGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDGFRKKNILTPRNSPAVHSPV
TVKIARPDRNTTQSPFFDHLNSPGILGSPGLGAPADPCSRETVLSVLKESRKREVDNEDD
RSFTAGQKSKRRRHDSSGSAHSAFEPLVPNGAPTQLVPKPGTLKRGLNAMMEESTMKKSR
TSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGFAQRKKASTRSLSPLSSPESSRSQTPE
RASKKPREEDARSPSSASSARSDKALMDPAPTTEKLTPAPEVHVASDSAGSGKRKRKIPL
VSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECVPEKSVSAPVVTTSSQ
PPVSSDPTPTLATLLASPLSISTSASVVAPIPVINLDPVPSSTAAPVTTPPSANPLLESL
KMMRNNALASAAATTAAPAVSLVKVLMTSAPLVTSALQAETSLTAPQPTPASSFQPTPTS
LSQPASTMPSAFTQALSQVTKAPSSVPTLGGASLFGLANTLTAPSSSLAPTATTETTSSN
NPLLASVFKPIFGPATPSSSAPESTPAVPTFKPIFGSATATSAFGQPAATSATSTASASA
SLLSGLTNSSTVAPAASLFTGVSSSTAPAPVPSAVPAAPPSVKSLFGNWSAPPATTSATT
VAPSTGSTFQFGATSTTAPAPTLSSTAAATTCNNGFSFGAMTTTSAVTQLALPATVQGGF
TFGQAAATQNSTTASFSGFGMATAATTTAAAPAIQSTFTFGKSSFDASAASAFPSATQAP
AAAIAAANPFTFGSAGATPAPFAFGAAATTAASTFGTPTKLAFGASSTGFAFGNTAAAPA
APAFGSATQTAGTLPASAPTFSFGGVSAQQAPATPVQPTTGGFNFGAAISGTRFGTPNLT
TQTPGFNFGAAASDKPAFGTSTPTFGQSTAAGPIAFGSPGTPVQGFSALAPSAFGSPSTP
SFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcatagcgtttagctctatcgtgatattctgtctactt
gtgtattatattccaacctttttttatatagctttcattcttggagtttgttgcgttgcc
tgtatttatcacagcggagaatcactcaacgctaggttaggccctcatccacgccatggt
ctgactattccacccgtgctgcgacgctggttgccagagattgcgaacggattacccaca
gcggggagagtcagaagtcgcaccgtcaagggtgatgttagggaaccgctagtattaacc
gaccaaagacgttccgagagcgctatttatcgcaaagtcgcgggacacagcgactcattt
ctgttcagtcctcgggatatactaatgggaagttacattgggaaggcagaaagtcctccc
tcagttgttgggaggccgcgagccggtgcgaattcgcgtgttcacccaaacgcacgagaa
caactgcgcgaaatattggcgcgacccaaccacgctgtttatactccgaacaaaagactg
tcattcgggagggagccccttggcatgatgggcaggttcaccataactccccagcgccac
taccccctccagcagaccggcacatcctctgtgggcatcctgccccctgcccagtgggac
ggcttcagaaagaagaacattctcacccctcgcaactccccggcagtccacagtccagtc
acagtgaagattgctaggccagatcgcaacaccactcaatcccctttctttgatcatttg
aactccccgggaatccttggttctccaggcctgggggcccctgcagacccctgctccagg
gagactgttctgagcgtgctcaaagagagccgcaagagagaggtggacaatgaagatgac
aggagcttcactgcagggcaaaagagcaaaaggaggcgccatgacagcagtgggagtgct
cactcggcatttgagccactagtgcccaatggagctcctacacagctggtgcccaagcct
ggtacgctgaagcgaggactgaacgctatgatggaggagtcaacaatgaagaagtcgcgc
acctcctccatcagttctgtgagttgtggcctaacccccagcggcaccctgggctcggtc
cgcaactctatccgcagctccctcagctcctcacaaggctttgctcagcggaaaaaggcc
tccactcgcagcctctcccctctctccagccctgagtcgtcccgctcccagaccccagag
agagcctctaaaaagcccagggaagaggatgctcgctcacccagctctgcgtcctcggcg
aggtctgacaaagcgttgatggacccagcacccaccactgaaaaactgactccagccccc
gaggtccatgtggcgtcagactctgccggtagtgggaaacggaaacgcaagattcctctg
gtgtccagtcgtagaggagaccaaatctctctgcctccacctcctgagctgggctacacc
atcactgtgaaagacctggatcaggagaagaaagccgctctcagccagatcaacacagtc
cttgaagagtgtgttccagagaaatctgtgtcagctccagtagtgaccacatcttctcaa
cctcctgtgtcaagcgaccccacacccaccctggccaccctgctggccagccctctttcc
atatcgacatctgccagtgtggtggctcctatccctgtgatcaacctggatcctgtcccc
tcaagcacagctgcacccgtcaccacccccccctcagccaaccccctcctggagtctctt
aaaatgatgaggaacaacgccctcgccagtgctgctgccaccactgcagctccggctgtc
tccttggtgaaagtattgatgacttctgcaccactggtgacttctgctttgcaggcagag
accagcttgactgcccctcagcccacaccagcctcctccttccagcctaccccaacctcc
ctctcccagcctgccagcaccatgccctctgccttcacccaggcactgagccaagtcacc
aaggcccccagcagtgtccccaccctgggtggagctagcttgtttggcctggccaacaca
ctgacagccccttcctcctcactggcccccactgccaccacagaaacaaccagcagtaat
aatcccctcctggcctctgttttcaagcccatcttcgggcctgcgaccccatcctcctca
gccccagagagcacacctgctgtcccaacctttaagcccatatttggaagtgccacagcc
accagtgcttttggacagccagccgctacctcagccacctccacagctagtgcatctgct
tcattgctcagcgggctcaccaacagcagtacagtagcccctgctgcctccctgttcact
ggggtgtccagcagcaccgctcctgccccagtgccctccgcagtcccagccgccccgcca
tctgtcaagtctctgtttggaaactggagtgcgccgcctgcaacgacctctgccacgacc
gttgccccttccacaggaagtacttttcagttcggcgccacctccaccacagctcctgca
cccaccctcagctccactgcagccgccaccacttgcaacaacggcttttcgtttggtgcc
atgaccaccacctctgctgtcactcaactcgccctcccagccaccgtccaggggggattt
acctttggtcaggctgcagccacccaaaactctaccaccgcatccttcagtggctttggc
atggccactgcagccactactactgctgcagcacctgcaatccagtccacgttcacgttt
gggaagtcgtcgttcgacgcctcagcagcatcagcgttccctagcgcgactcaggccccg
gctgctgctattgcagcagctaatcctttcacatttgggtcagctggggccacccctgcc
cccttcgcttttggtgcagctgccactacggcagcttctacatttgggacccccactaag
ctggcatttggagccagctctacaggttttgcatttggcaacaccgcggctgccccagca
gcccctgcctttggctctgccactcagactgccggcacactcccagcctccgccccaacc
ttctcgtttggtggtgtgtctgcacagcaagcccccgctacccctgtccagccaaccacc
ggaggattcaacttcggcgcagcaatttcaggcactcggtttggaacacccaatctcaca
acacagacaccaggattcaactttggggctgctgctagtgacaagccagccttcgggaca
tctacccctacttttggccagagcactgctgcgggtcctatcgcctttggaagcccagga
actccagtccaaggattcagtgctttggcaccctcagcattcggctctccatcaactccc
tcgttctccattggcgctggctccaaaacgtcaggggcacgccagaggctacaggcccga
aggcagcaccccaggaagaaatag
DBGET
integrated database retrieval system
