Salvelinus sp. IW2-2015 (Arctic char): 111951134
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Entry
111951134 CDS
T05762
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111951134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111951134
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111951134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
111951134
NCBI-ProteinID:
XP_023824929
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All DBs
Position
LG23:39211018..39225959
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AA seq
1250 aa
AA seq
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MDVLDHMLTDPLDSEKANDGRITEECMLGDCRVSIPEDLLEDPEIFFAVLSESTWSKVLT
DEQRQHLRQXLPHFPDDNTSEQDRXISDLFNNQNFCFGNPXHLAQKLFRDGHFNPEVVMY
RELCAKSQKKRQLYSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVKRKXPARTPGEMQ
EQKVRGRVCWILREVKTECGDRYPSSDDDASSLPTPQSPSSPTPTVSVRVLPSLSTQDMK
TTDKPXLGANDMRAMLRRHRDKRRRQPDHPDLMTSDIHLGDMMSRVDVGCKGAMMALFDP
ARPKRKMREERRKKMRRIKVESEDPCQALMPSEAPSLDTPVTPLPRVKEEPLGEVQDNPV
MVEEIAVTFFNLLENILRLEGLASTAMLEEKVRQWQTSPASSLNPRFXPASCWSDMVLPA
LHFLAGESKVGMMALPSGFTPYVVFRENSQQWEWIGLEGPSQNGQKDLSALWQLWVDSKD
LVVVKAECEELTEMTSPTPRASWTDYVVRASTGDERHVFQVQEQQRYDQPHKAFTFRMHG
FESQVGPVKGVFDKMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICEL
LKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIVRKLWNYLHRDRGQEEFEKIH
QAQATAAKARKTLQQKPKPASKPSGSKEDGGKTSGGLEAGDMGGXMSPTPSTPGTPKSPL
APVATTPTKAGIPDSVKTGPGFLLVSPPPIPQLGTLLSSSQSGPQISQPATSQHSARVVG
HQSGSPPQVRVVSAQTARGQQAMLVHQTPRQIRVPVTVGAKVITQTVVSLPLRTLSFGSP
TQGQAARGQTTLSMSGLTTAQTGFPGSPAHHPASPAVLQGVTSQNIIQQVAITGQMGVTA
QGGAAIPIPATNLRIQGKDVLRLPLSSITTDSKGQTVLRITPEMMATLTKSPVTTFKLTP
DMLGTATTKSISATLHLTPPHHSSPCSPASSSGDVLTSKTYAGTTTLLKAAGDAMRLMPT
LAVTMAEQKARTFSTVSSSDSKSGTAIRIMPGLGVIPQKRGQAITVTTTTGSKPVSTRAA
TVPIATSGVAVAKGVTIGPSASGSLTQGTATATVRQVPVTATVVSTRPGKLPARIPGPLS
VLSQPLKSKSGMTTPILKGNVSTNISSLGRNIILTAMPAGTKLIAGNKPVSFVTAQELQQ
LQQQGQATQVRFRTVPAQLSAAGSPKSVSTAVVPTAPSPKRTPDPPPPAQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccttgatcacatgctgacagaccccctggactcagagaaggccaatgatggg
cgcatcactgaagagtgcatgttgggagactgtcgagtgagcattccagaagacctgctt
gaggatcctgaaatcttcttcgctgtgctgagtgaaagcacatggtctaaagtactgacc
gatgaacagaggcagcatctccgtcaattsttaccgcactttcccgacgacaacacctct
gagcaggaccgcaycatcagcgacctcttcaacaaccagaacttctgcttcggaaacccc
ttscaccttgcacagaaactgttcagagatggccattttaatccagaagtggtcatgtac
agagagctgtgtgccaagtcccagaaaaaacgtcagctctactctttgcagcagtactac
cacaaactcctcaaacagatcctggtctctagaaaggaactactggagttggcggtccgc
agtggccctgacatcgcggtaaagagaaagtkccccgcccggacgcctggtgagatgcag
gaacagaaggtcagaggaagagtctgctggatactaagggaagttaaaacggagtgtgga
gaccgatacccgtcatctgacgatgatgcctcttcgctgccaacacctcagtctccttcc
tctcccacacctacggtctctgtcagggttctgcccagtctctccacccaggacatgaaa
accaccgataagccaragctgggagcgaatgacatgagagccatgctacggagacataga
gacaagaggagacgtcaaccggatcatccagatttgatgacctctgacatccacttgggc
gacatgatgtctagagtggacgtgggttgtaaaggcgccatgatggcactgtttgacccg
gctcggcccaagaggaagatgagggaggagaggagaaagaagatgaggagaattaaagtg
gagtccgaggatccctgtcaggctctgatgccttcagaagctccatcacttgacacccca
gtcactccactgcccagrgtcaaggaagagccgttgggggaggtgcaggacaaccctgtc
atggtggaggagattgctgtgaccttcttcaacctgctggagaatatcctgagactagag
gggctcgccagcacagccatgttggaggagaaggtccgacagtggcagacatctccagct
agttccctgaaccctcggttctmcccggcctcctgctggtcagatatggtgctgccggcc
ctgcacttcctggctggggagagtaaagttggtatgatggctcttcccagtggcttcacc
ccttatgttgtgttcagggaaaactcacagcaatgggaatggattggtcttgaaggtccc
agtcagaatggacagaaggatttgagtgctctgtggcagctgtgggtcgactccaaggac
ctggttgtggtcaaggcagaatgtgaagaactaacagagatgacttctcccacccctaga
gccagttggacagactacgtggtgcgggccagcactggagacgagaggcatgtttttcaa
gtgcaggagcaacagcggtatgaccagccacacaaagccttcaccttcagaatgcatggc
tttgagtctcaggtggggcctgttaaaggggtctttgacaagatgtctctcaacaaagcc
agagaacacactctgctgcgctcggaccgcccagcctatgtcaccatcctctccctggtg
cgggacgcagcagcccggctgcccaacggagaggggaccagggctgagatctgtgagctg
ctcaaggactctcagttcctggcaccagatgtcaccagtgctcaggtgaacacggttgtg
agtggggctctggacaggctgcactatgagaaggacccctgtgtgaagtatgacatcgtc
cgcaagctgtggaactacctgcaccgcgaccgcggtcaggaggagtttgagaaaattcac
caggctcaagctaccgctgccaaggccagaaagacactgcagcagaaacctaaacctgca
tccaagccttctggcagtaaggaggacggtggtaagacctctggaggcttggaagctggt
gatatggggggtsccatgtccccaactcccagcacccctggaacccccaaatcacccctc
gcycctgtagccacaacccccaccaaagctgggatcccagattcggtcaagaccggtcct
ggttttctcttagtgtctcctccccccattcctcaactggggaccctgttgtccagcagc
cagtctggcccacagatctctcagccagctacctcccagcactcagccagggtagtgggc
caccagtcaggctctccgcctcaggtacgagtggtctctgcccagacagcaagaggacag
caggccatgttggtgcaccagacccctcgacagatcagagtgccagtcaccgtgggtgct
aaggtcatcacacagaccgtggtgtcgttaccactaaggaccctgtcttttggtagcccc
acccaggggcaggcagccagagggcagacgaccctgtcgatgtcaggcctgaccactgct
cagactggcttccctggcagccctgcacaccaccctgcctcccccgctgtcctacaggga
gtcaccagccagaacatcatccaacaggtggccatcacaggccagatgggcgtgacggct
caaggtggagcagctattccaatacccgctacgaatctccgcatccaaggcaaagatgtg
ctccgcctgcccctctcctccatcaccacagactctaaaggacagacggtgctgcggatc
acacctgaaatgatggccaccctcaccaagtcccccgtcaccaccttcaaactcaccccc
gacatgttaggcaccgccaccaccaagagcatatctgctactctccatttgaccccaccc
caccactcctccccctgcagcccagcctcctcctcgggtgacgttctgacgagcaagacc
tacgctggcaccaccaccctgctgaaggctgcaggggacgctatgcgcctgatgcccacc
ctggcagtcactatggccgagcagaaggccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccgccatacgaataatgcccggcctcggggtcatcccacagaaacgg
ggtcaagccatcaccgtgacaaccaccaccggcagcaaaccagtctccactagggctgcg
actgtccccatagccaccagcggagtggctgtagctaaaggggtgacgattggcccttct
gcctcaggctctctgactcagggaacagccacagctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacgaccagggaagctaccagctcggatcccagggcctctgtct
gtcctcagccaaccacttaaaagcaagagtgggatgaccacgcccatactgaaaggaaac
gtcagtacaaatatcagcagtctgggcaggaacatcatcctcaccgccatgcctgcaggc
accaagctgatagctgggaacaagccagtcagctttgtcacggctcaagagttacagcag
ctgcagcaacaggggcaggccactcaggtgcgtttccggacggtgccagcccagctctct
gcagcaggctcccccaagtctgtgtccactgccgtagtccccaccgcaccctcgcccaaa
cgaaccccggacccgccaccgccggcacagtga
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