Salvelinus sp. IW2-2015 (Arctic char): 111951570
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Entry
111951570 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat neuronal protein 3-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111951570
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
111951570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_9
ig
LRR_1
Ig_2
fn3
LRRNT
Motif
Other DBs
NCBI-GeneID:
111951570
NCBI-ProteinID:
XP_023825509
LinkDB
All DBs
Position
LG24:4375976..4392371
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AA seq
706 aa
AA seq
DB search
MKDVSFVDRFFVGLAMTAFVLASEERVDCPQLCVCEIRPWFSPSSVYMEAPIVDCNDLGL
FTLPGRLPTDTHVLLLQTNNIAKIEKPLDYLANITEIDLSQNNLSSMSDIHLGRLPQLLS
FHMEENWIRQLPDSCLAELANLQELYMNHNLISSISPTAFQGLHNLLRLHLNSNKLQTIS
SEWFDTIPNLEILMIGENPITSVQDMNFKPLCNLRSLVLTRMNLSQLPDGALSGLDNLES
ISFYDNTFPEVPHAALXNJKNLKFLDLNKNPXGRIQXGDLADMLHLKELGINSMPELVSI
DSLALNNLPELTKIEATNNPXLSYIQPNAFYKLPRLETLMLNGNALSALHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFXVEPPEYEGQHVRQVHFREMTEICL
PLISPDSMPGHVSVDNGSSVSLHCRAFAEPEPDIYWITPSGTRVLPNTVSDNYXMHXEGT
FDIYEVTEXEAGLYTCVAHNLVGADLKSVSVEVDGYFPRPANGSLDVNIKSVQXNSVLVA
WKAXHGGLAPNIKWYXASDPNXPTMAFXARVPSDVKVYNLTHLTPATQYKVCVDIRGILY
KHDTKCVNVTTKGLELXAKDTEKWHAAVIAVFGVLLAVISVACLLIYVSLRNHHLCGDLR
KCRSKVSLTPVAGLHSPFTRLWVSGNGLPTAVEVKPTVINVSDNAF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcatttgtggatcgtttcttcgtgggccttgccatgactgcctttgtt
ctggcctctgaggagagagtcgattgccctcagctatgtgtgtgtgagatcagaccctgg
ttctctcccagctctgtctacatggaggccccaattgttgactgtaatgacttgggactt
ttcactctgcctgggagattaccaacggacacacacgtgctattgctgcagaccaacaac
attgcaaagattgagaaacctttggattacctggccaacatcacagagattgacttgtcg
caaaacaacttatcctcgatgagtgacatccacctcgggcggctgcctcagctgctgtcc
ttycacatggaggagaactggatacgccagctcccagatagctgcctggcagagctggcc
aaccttcaggagctttacatgaaccacaacctgatctcctccatctcccccacggcgttc
cagggtctccacaacctcctccggctccacctcaactccaacaagctgcagacgatcagt
agtgagtggttcgacaccatycccaatctggaaatactcatgattggggagaatccgatc
acctccgttcaagacatgaacttcaagcccctttgtaatctccgaagtctagttctgacc
aggatgaacctatcgcagttacccgacggcgctctatctggcctcgacaacttggagagc
atctcgttctacgacaacaccttccccgaagttccccacgcagctctgkggaacmtaaag
aacctcaagtttctggatctwaacaagaatcccatkgggaggatacagkgmggagatttr
gcygacatgctccacctcaaagagctgggcattaacagcatgccggaactggtctctatc
gacagcttrgccctcaacaacctccccgaactgactaagatcgaggccaccaacaacccc
aygctctcrtacatccarcccaatgctttctacaaactgcccaggctggagacyttgatg
ctgaatgggaacgcgctragcgccctacacaggattacrgtggagtccctccccaacctg
cgggaggtgagcatgcacagcaaccccatccgctgcgactgtgtggtccgctggatgaac
atgaacaagaccaacatacgcttcatggaaccggattcmctcttctgrgtggagcctccc
gagtacgagggccagcatgtscggcaggtccacttcagggagatgacagagatctgtctg
cctctcatctcrcctgayagcatgcckgggcacgtragcgtrgacaacgggagttctgty
tcgctccactgccgggcctttgccgaaccrgaaccggacatctactggatcacyccttcr
ggtaccagggtcctgcccaataccgtttcagataaytactaratgcacrcagagggaacy
tttgacatctacgargtaacagagaycgaggctggyctgtacacctgcgttgcccacaat
ctygtcggrgcagacctyaagtcagtctcmgtggaggtggatggatacttcccrcgacct
gccaacggctctttggacgtcaacatcaaatcagtgcagwccaactcggtcctggtggcc
tggaaagccycccatggcggtctggctcctaacataaagtggtacawggcttccgacccc
aackacccgaccatggcyttcwcwgcacgcgtaccgtctgatgtgaaagtgtacaatctc
acacatctgactcccgccacccagtacaaggtgtgtgtggacatccgcggcatcctctac
aaacacgacaccaaatgtgtcaatgtcaccacaaagggattagagctggrggccaaggac
actgaaaagtggcacgcggcagtaattgctgtctttggtgtgcttctcgctgtgatttca
gtggcctgtctgcttatttatgtgtctctgaggaaccaccacctttgtggggatttaagg
aaatgccgctccaaagtgtccctgacgccggtggctggcctgcactctccttttacgagg
ctgtgggtctcagggaacggactgccaactgcagtggaagtgaaacccacagtcataaat
gtatctgacaatgccttttaa
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