Salvelinus sp. IW2-2015 (Arctic char): 111952446
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Entry
111952446 CDS
T05762
Name
(RefSeq) myocyte-specific enhancer factor 2A-like isoform X1
KO
K09260
MADS-box transcription enhancer factor 2A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111952446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952446
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
111952446
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
TFIIA
DUF6591
Motif
Other DBs
NCBI-GeneID:
111952446
NCBI-ProteinID:
XP_023826879
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Position
LG26:22325620..22457192
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AA seq
501 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVEKLRNKGHNDLCASPDPDDCFGHSPLMDDRFGKLS
EESDLMYKRCGPTALPQQNFPMHVAVPVSNQNTMSYNPGGSMSSQALAQAAASLSDSGML
SPPQASLHRSGGQQRPPTQGNAGDLQVKYGLAFLEQLPRSGFVNSRGSPGLLGTPSGNGL
GKVMPTKSPPPPGVNMGMGNRKPDLRVVIPPSSKGMMPPLSEEEEMDLNTQRLSSSQTLA
TPVVSVTTPSLPPQGLVYSGMPSAYNTEYSLSSAEISSLQGFGSPGLSLGSMSAWQQHQL
GQAALSSLVGGGQLPQGSNLSINTSQNINIKSEPISPPRERVTPSGFHQQQQQQRQQQQQ
QQQQQQQQQQQQQQASSRQDLGRSPVDSLSSSCSSYDGSDREDHRPDFHSSSMGLGRPPT
GTEDNRASPSVKRMRMDTWVT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaagaagatacagatcacgaggatcatggatgagaggaacaggcaggttacc
ttcacgaagaggaagtttgggctaatgaagaaggcctatgagctcagcgttctatgtgac
tgtgagatagccctgatcatattcaacagctcaaacaaactctttcagtatgcaagcaca
gatatggacaaggtcctgctcaaatacactgagtacaacgagccccacgagagcagaacc
aactccgacattgtcgagaaattaagaaacaaaggccataatgacctgtgtgccagtcct
gatccagatgactgttttgggcacagccccctcatggacgaccgtttcggcaaactaagc
gaagagagtgatttaatgtacaagcgctgtggtcccacagcgctgccccagcagaacttc
cccatgcatgtggcagtgccagtctccaaccagaatactatgtcctacaacccaggagga
tccatgagcagccaggccctggctcaggccgcagcctctctgagtgacagcgggatgctc
tccccccctcaggcctccttacacaggagcgggggtcagcagaggccccccactcaaggc
aatgcgggggacctccaagtgaaatatggattggcgttcttggaacaactaccgaggagt
ggctttgtcaactccaggggctctccgggactcctgggcacacccagcgggaacggcctg
gggaaagtcatgcccaccaagtctccaccgccccctggagtgaacatggggatgggaaat
cgcaagccagacctgagagtggtgatccccccgtccagcaaaggcatgatgcccccactg
tcagaggaagaggaaatggatttgaacacccaaaggctaagcagctcccagacactggcc
accccagtagtgtctgtcaccacccccagcctgccccctcaaggcctggtctactcaggc
atgcccagcgcttacaacactgagtactccctgagcagtgcagagatctcctccctacag
ggcttcggctctccagggctctctctgggctccatgtcggcatggcaacaacatcaactg
ggccaggcagctctcagctctttggtgggtggtggtcaactacctcagggctccaacctc
tctatcaacaccagccaaaacatcaatatcaagtcagaacccatctcccctccacgggag
cgcgtcaccccctctggcttccaccagcagcagcaacagcagcggcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcaggcgtccagccggcaggac
ctgggccgctcaccagtggacagcctcagctcctcctgcagctcatacgatggcagcgac
cgcgaggaccaccggccagacttccactcctcctccatggggctgggcagacccccaacc
ggcaccgaggacaacagggcgagcccttctgtcaagcgcatgcgcatggacacctgggtg
acatag
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