Salvelinus sp. IW2-2015 (Arctic char): 111952674
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Entry
111952674 CDS
T05762
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111952674 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111952674 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111952674 (usp13)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111952674 (usp13)
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111952674 (usp13)
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111952674 (usp13)
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111952674 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
111952674
NCBI-ProteinID:
XP_023827334
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Position
LG26:3596124..3634381
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AA seq
868 aa
AA seq
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MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMLLKRHVKEKATGSAGGAISRRRNGRVFLDLELNRDFNGDEYECEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQESDSWDEEIQVSKHARSLRQQD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGAGGNGHALDHYKDTNFPLAVK
LDNITADGADIYSFDEEEAVLDPHISEHLQHFGIDMLQMQQNGTENGHLNTDNTESVRPR
VSEWEVIQESGMKLKAVYGSGFTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIYD
YSPLDPTTDFSTQMAKLGHGLLSGLYSKPPMKSELIEQVMREEYKHQSKGISPKMFKAMV
SKGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDVFRYLVEERVQCCQTQKVCYNQ
KVDYLMQLPAPMEAASNREELIAYEAKRREAEENMRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGVDWVPKKLDLSIDVPDFLDLSR
LRGTGLQAGEEELPDLTPPIVLPEDTRDDSMNSSDSPDIDESAAMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPSFMEPGPSMASLGLAATPLDNQPPEESI
AILTSMGFPRRHTVQALKATNNNLERALDWIFTHPEREEEEEASDDLLDMSDIMEPNDNT
FSNANTNSHSTLSPDQDASGPRIKDGPGRYELFAFISHMGASTMSGRYVCHIKKEGRWVI
FNDHKVTCVCQKGLQNDLGYIYFYRSAV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatttaggagagctgcttgtcccatatatgcccaccatcagagttcccaga
acaggagacagggttttcaagagcgaatgtgccttttcctacgattctcccgagtctgag
ggaggattgtatgtgtgtatgaacacattcctgggctttggcagagaacatgtggagaga
cattaccgtaaaaccggacagagtgtttacatgctcctcaaacggcatgtcaaagagaaa
gccacaggttccgcaggaggcgccatctccagaagaagaaatggcagagtgttcctggat
ttagaactaaaccgtgattttaacggggatgagtatgagtgtgaagacgaggccaagctc
gtcatattcccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgtgatgccgtgctcaacgctgcgtcagcctacaaaaagcaggagtct
gactcctgggacgaggagatccaggtgtccaaacatgccaggagtctccgacagcaggac
aacggagtgagaatcccacccagtggttggaaatgtcagaagtgtgagatgagagagaac
ctgtggctgaacctgacggacggagcggtgctttgtgggaagtggttcttcgacggtgct
ggaggaaacggacacgccctggaccactacaaagacaccaacttccccctggcagtcaaa
ttggacaacatcaccgcagatggagcagatatatattcatttgatgaagaagaagcagtc
ctggaccctcacatatccgaacacttgcaacactttggaatagacatgctacagatgcag
cagaatggaacagaaaatggccacctcaacacagacaacacagagagcgttcggcctcgg
gtcagcgagtgggaggtgatccaggagtcaggcatgaagctgaaggcggtgtatggctca
ggtttcacaggcattaagaacttgggtaacagctgctacctgggcaccaccatgcaggtc
cttttcagcatcccagagttccagagggcgtatgttggaaatctacagaggatctatgac
tactcacctcttgaccccaccacggatttcagcacacaaatggctaaactgggccacgga
cttctctcaggcctgtactccaaaccaccaatgaaatccgagctcattgaacaggtgatg
agagaagaatacaagcaccagtcgaagggcatctctcccaagatgttcaaagccatggtc
agcaagggccaccccgagttctcctccaacagacagcaagacgcacacgagttcttcctg
cacctcatcaayctggtcgagagaaacagtgctggctcagagaaccccagcgatgtcttc
cgctacctggtggaggagcgtgtgcagtgctgccagacgcagaaggtgtgctacaaccag
aaggtggactacctgatgcagctcccggcccccatggaggctgcctccaacagagaggag
ctgatagcgtatgaggccaagcgaagagaggcagaggagaacatgagagcccctccagag
cctgtgagggcccggatccccttcacagcgtgcctgcaggccttcacagagccagagaac
gtccccgacttctggagctcagcactgcaggccaagtcagctggagtcaagacttctcgt
ttcgcctccttcccagagtatctggtagtgcagattaagaaattcacatttggggttgac
tgggttccaaagaaattagatctgtccatagaygtaccagacttcctggatctgtctcga
ctccggggcacagggctgcaggcaggagaggaagagctccctgacctcaccccccccatc
gtcctgcctgaagacaccagagatgactcaatgaactcctcagattccccagatatagac
gagtcggcggctatgcagctggcggagatgggcttccctctggaggcctgtcggaaggcc
gtttactacacagggaacatgggccctgaaatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgagcccctggccctgccctccttcatggagccaggcccctcc
atggccagcctgggcctggctgccacccccctggacaaccagcctccagaggagagcatc
gccatcctcacgtccatgggcttcccccgccgccacaccgtccaagccctcaaagccacg
aacaacaacttggagagggctctggactggatcttcacccatccggagagggaggaggag
gaggaggctagcgacgaccttttggacatgtctgacatcatggagcccaacgacaacacc
ttctccaacgcaaacacgaacagccactccacgctgtccccagaccaggatgcatcgggc
ccccggatcaaagacggacccggacgttacgagctttttgctttcatcagccacatggga
gcgtccacgatgtctggtcgttatgtatgtcatatcaaaaaggaaggaagatgggtgatc
ttcaatgaccataaagtaacatgtgtttgtcagaaaggcctccaaaacgacttgggctac
atctacttttaccgttcggctgtctaa
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