Salvelinus sp. IW2-2015 (Arctic char): 111954239
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Entry
111954239 CDS
T05762
Symbol
knl1
Name
(RefSeq) kinetochore scaffold 1 isoform X1
KO
K11542
protein CASC5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111954239 (knl1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111954239 (knl1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111954239 (knl1)
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111954239 (knl1)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
KMN network proteins
111954239 (knl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MELT
Knl1_RWD_C
Spc7
DUF3016
Motif
Other DBs
NCBI-GeneID:
111954239
NCBI-ProteinID:
XP_023829561
LinkDB
All DBs
Position
LG28:16784276..16794086
Genome browser
AA seq
1850 aa
AA seq
DB search
MEPPDAASRTDSDHVGSSKRRISSILKVPRTSIKFTGPELEESRVEVVKPVEKRISRRVS
FATSNDVLLFSKDVKNGSPVRSPLQNLTTTAENISIHTGSIDGAQPITGMETLLNAPLHV
SQRNKENVMFNQDDYGEKTMMFTGEDTAFMDMTHSHTILIANDSESSIVLPNEINVTTPT
CGNMDFTFSMEKGKTGFFQDSTENCAPFKNPSTLARGIDPEFEHFLASITKSSGAMCNPI
APKSSTTVAFHRAASPPEKTNNRRFLAALNARKSGVDKENQVPALSTTGGDCTVGSIIPQ
RQGPQFMNTSTMQTEQDHMDLTKSHTTLIDGKGVFQCVQTVSSEEQRLRGSTFSQVSVST
DPDEMELTRSQTVAIDSKAIWMFGPNPSQKIERKSVAFASDPNKTQIFSGDDHGMEMTAA
LNVPLQENVCAPTKKGESSPWMFPPENRIPSVQRNQQTFHSTSYPYSDDMEMTRCQTVAI
DSKSVGLTEIPLLGNTRKSLSFMPSTYRGVFFSEDGNGMDLTEALTGNIVSNSHIAINKP
LQRLFPTTEMFFHSDRSTNMERTSGQRSNKVWEPASSDPDDMEITKSLTAVIDSKYCVME
KPSLSKPKTKFDLGLSSVPPSMEYGNFSDDANSVKRVLDQVKGVSVVISDPDDMEITRSQ
TVAIDTKSLNVVNRMQNTMKSISFMSTSNRPSHISEDDCGMDMTKSLTVSIDHRNGLNMT
DETTGRLFPISKHQKETFEKSLIRADLSTDAMEITRSLTGVIDTRGFGGVTPSRQGGRGR
FVSFLDSNKTLIGENDHCMEMTQALTAQILTNVSHSAHGGETLARMSTISKTNLTGAKGN
HFVEVGHITDQRRSSDSDDMDMTRSQTAVIESENIKMGNRDPFRARQCLSSVNKTLQMVP
AAEQSAHGEITFQLGVESLCSKKAPTSSDSDEMELTRIQTVAIESKVINMFSPETNPPLG
NVSISQAHDMEVKRVVEATRCRNNPVAVPSNLEEKMARDETEMFSEDHEMEMTKAVTTQI
EQHAPTNAKCPSSTTNAISLCLPEGHPRENPTNLTEHFDLKGLADRNDPDLKDEDCSFIP
NKPESSPIASSVSIEDDNVPSKKAKTRRMSLADLQLKLNHMSRMINESTEVMGSCTAPLS
HLMRTSDQHSVETESLSTVDYGSKTMGLMTERPASVNLEDHIIHNDKPNMTAPLNLKSKC
LASRLSFGGFLPKLPRIAKPSESNQSNSVTDFGKLLKKNRLSGTHELRSNTSMDNIDDEV
LPDISGEEDLSETMDTKSPQRVDDKGTLFLGKVVKDVVEHEVFKEPVLTVTQCQKRPLPE
DGHDDSMDEVKRNKPSTENIREMIPHTQVVQWDSNCTGAAADGSSSNSNLRCEGTFESTY
RQSQFESLLDNTGDYTSDVQKKLQDGSITVAEFLKLFSIDFVIHKPRQSILPARIVSDLD
RKTEDLLIEKHINRPKQRVYETDCQILTEMVEGRLKARLRVQDSLLQSVNGTLWEAVKGF
SDEELLLFGSKLKERRTFFRKRSKVRSHEMKAVLYSDLVHTTREAQHNLRGNIEKTDQCL
KDLDECLHDLEAELAAVEGTGVEDCEPTLKARQQGLEKINKAIAKSERQMCELELQKINS
VDKVDRLRKETLELEKHISMLDRVNEWKFVQKDDMKTVYSFLYESLLLEVQFEKPNGEVC
EQTERNIMDITFQRQMDDEKSQCYSRLVHNLLCQYIGSETTWFKKYPTSRYIPALLHDVG
LVVSRCRLLGEEIHLMKKWGALRLDILDISCVDTQVRILFSSLKSFSKFEMTVAVTSAYP
FGLFHVQNFQNHIGNATKDQVEXIVSSVTPAKNYLTKIVKRIHESLLCLD
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcctgatgctgcatcaaggacggacagtgatcatgttggatcctccaaacgg
cgtatttcttcgatcctgaaagttccacggacatctatcaaattcactggcccagagcta
gaggagagtcgggtggaggtggtcaagccagtagagaagaggatctccagaagagtcagt
ttcgccacttccaatgatgttctactgttttcaaaagatgtgaagaatggctcccctgtc
cggagtcctctacaaaacctcacaactacggcagaaaacataagcattcatacgggttcc
attgatggggctcaaccaatcacaggcatggaaaccttgttgaatgctcccctccatgtt
tcacaaagaaataaggaaaatgtcatgttcaaccaggatgattatggggagaaaacaatg
atgttcacaggagaggacacagcatttatggatatgactcacagtcacacaatactcatc
gccaatgattcagaatcatcaattgttctgccaaatgaaatcaatgtgactacacctacc
tgtggaaacatggattttactttttcaatggagaaaggtaaaactgggttttttcaggac
tcaacagagaattgtgccccctttaaaaacccttccaccttagccagaggtatagatcca
gagtttgaacatttccttgccagtataacgaagtcaagtggcgccatgtgtaatccaata
gctcccaaatcctcaactactgtggcattccaccgagctgcatcccctccagaaaaaaca
aacaacagacgtttccttgcggcgctcaatgcccgcaagtcaggagttgataaagagaat
caggtcccagctttgtcgacaacggggggagattgtacagtgggctcaattatccctcaa
aggcaagggcctcagttcatgaatacatctacgatgcaaactgaacaagatcatatggat
ctcacaaaaagccatacaactttgatagatggcaaaggagtttttcagtgtgtgcaaact
gtaagctctgaagagcaacggcttaggggaagcactttcagccaggtatctgtctctact
gatccagatgaaatggagttgaccaggagccaaactgttgccattgactccaaagctatt
tggatgtttgggccaaatccctctcagaaaattgaaaggaaaagtgtggccttcgcatca
gatcccaataaaacccagatcttctcaggtgatgaccatggcatggagatgactgcagct
ctcaatgtacctctccaggagaatgtgtgtgctccgaccaagaaaggcgaatcatcaccc
tggatgtttcccccagaaaacagaatcccctccgttcagcgaaatcaacagacctttcat
agcacctcctatccatactcggatgacatggagatgacaagatgtcaaacagttgccatt
gattccaaaagtgtaggcctaacggaaattcccttactagggaatacaaggaaaagtttg
tcttttatgccatccacttacagaggtgtgtttttttcagaagatggtaatggtatggat
ctgactgaggccctcactggaaatattgtgtcaaacagccatatagcaattaataagcca
ctacagagattgttccccacaacagagatgttctttcactctgatcggagtacaaacatg
gagaggacttcaggacagagaagtaataaagtatgggagcctgcatcctctgatcctgat
gacatggaaatcacaaaaagcctaactgctgtaattgattccaaatattgtgtgatggag
aagccttctcttagcaaaccgaagaccaagtttgacctgggtctatcctctgtgccacca
tctatggaatatggcaatttctcagacgatgctaacagtgtgaagagggtgctggatcag
gtaaaaggtgtttctgtagtcatatcggatcctgatgacatggaaataactagaagtcaa
actgttgccatcgacaccaaaagcctcaatgtggtcaatcgcatgcaaaacacaatgaaa
agtatatccttcatgtcaacttccaacagacccagtcatatatcagaggatgactgtggt
atggacatgaccaaatctctcactgtgtctatagatcacagaaatggtctgaacatgaca
gatgagaccactggcagattgttccccatatcaaaacaccaaaaggaaacgtttgagaag
agcctgattagagcagatcttagtacagatgccatggaaatcacaaggagcctaactggg
gttattgacaccagaggttttggtggcgtaactccttcacgccaaggtggtagaggaaga
tttgtcagctttttggattcaaataaaactcttattggtgagaacgaccattgtatggag
atgactcaagctctcactgcacagatattaacaaatgtgtcacattctgcccatgggggt
gagaccttagctaggatgtccacaatctcaaagacaaatttaactggagcaaagggcaat
cattttgtggaagtgggtcacataaccgatcaacgtcggtcatcggattcagatgacatg
gatatgacgagaagtcagaccgctgtaattgagtctgaaaacatcaagatggggaatcgt
gaccctttcagagcaaggcaatgtttatccagtgtgaataagactctgcagatggttcct
gccgcagagcagagtgcacatggtgagattacgtttcagttaggtgttgaaagcctctgc
agtaaaaaggcacctacatcttctgactctgatgaaatggaactgacaaggatccagact
gttgcaattgaatccaaagttattaacatgttttcccccgaaacaaatccaccattaggg
aatgtgtcaattagtcaggcacatgatatggaagtgaaacgagtagtagaagcgacacgt
tgcagaaataatcctgtagctgtaccctctaacctggaggagaaaatggccagagatgaa
actgaaatgttttctgaggatcatgaaatggagatgaccaaggctgtcacaacgcaaatt
gaacaacatgcacctaccaatgcgaagtgcccttcatccaccacaaatgcaatttccttg
tgtctaccggagggtcaccctagagaaaaccccactaaccttacagaacactttgaccta
aagggattagcagaccgaaatgatcctgatctgaaagatgaagactgctcctttattcct
aacaaaccagaaagctctcccattgcctcttcagtctcaatagaagatgataatgtacct
tcgaagaaggcaaagaccaggcgaatgagtttggcagatctgcagttgaaacttaatcat
atgagccgcatgataaatgaatccactgaagtgatgggtagctgcactgcacctttatct
cacctgatgaggacctctgaccaacacagtgtagagacagaatccttatcaactgtagac
tatgggtctaaaaccatgggattaatgactgagagaccagcaagtgtcaacttggaagac
catattattcacaatgacaaacctaatatgactgctcctttaaacttgaaaagtaaatgc
cttgcatcacgactgtcatttggtggtttcctgcccaaactcccacgaatagccaaaccc
tctgaatcaaaccagtccaatagcgtgacagattttgggaaacttctgaagaagaataga
ttgagtggcactcatgaactgaggagcaacacctcgatggacaacattgatgatgaagtg
cttccagacattagcggtgaagaggacttatcagaaactatggacaccaagtcacctcag
agggtcgacgacaagggaactcttttcttaggcaaggtggtcaaggatgttgtggagcat
gaggtctttaaagagccggtcctaactgttacccaatgtcagaagaggcccctaccagaa
gatggccatgatgactccatggatgaggtaaagaggaataagccatcaacagaaaacatc
agagaaatgatcccccacacacaggtagttcagtgggacagtaactgtacaggagctgca
gctgatggctccagcagcaactccaacctccgatgtgagggcacatttgagtcaacttac
agacaaagccaatttgagtccctgcttgacaacactggggactacacatctgatgtacag
aagaaactccaagatggcagcattacagtggctgagttcctgaaactcttcagcatcgac
tttgtcatccataaacctcgacagagtattctgcctgcgagaattgtgtcggatctcgat
cgcaaaacagaggacttgttaatcgagaagcatatcaaccgtcccaaacagagggtgtat
gagaccgactgccagatactcacagaaatggtggagggcaggttgaaagcacgtctgaga
gtccaagacagtcttctgcaaagtgttaatggaacactttgggaggcggtgaagggcttt
tcagatgaagagttgctgctttttggttcaaagttgaaagagaggaggacattcttcaga
aagagaagcaaagtgcgatctcatgaaatgaaagcagttttgtattctgaccttgtgcac
acaactcgggaggcacaacataacttgagaggaaatattgagaagaccgatcagtgtctg
aaagaccttgatgaatgtctacatgacttggaagctgaacttgccgctgtggagggcaca
ggggtagaggactgtgagccaaccttgaaagcaaggcagcaagggttggagaagatcaac
aaagcaattgctaaaagtgaaaggcaaatgtgtgaattggaactacagaagataaactct
gtggacaaagtggacagactccgaaaggaaactctggaacttgagaaacatatttccatg
ctggatagagtgaatgaatggaagtttgtgcagaaagatgacatgaagacagtctacagc
tttctctacgagtccttgctgttggaggtgcagtttgagaaacctaacggagaggtctgt
gaacagactgagcgtaacatcatggacatcacgtttcaacgccaaatggatgatgaaaag
tcacagtgctactctcggcttgtacacaatctgctatgccagtacataggcagtgaaacc
acttggttcaagaagtaccccaccagtcgatacattcccgcgttgctgcatgatgtgggt
ctggtggtaagccgctgtcgcctcctgggagaagagatccacctgatgaagaagtggggc
gctctgaggctggacatcctggacatcagctgtgtggacacacaagttcgaatcctgttc
tccagtctcaagtcatttagcaagtttgagatgacagtagccgttacatccgcctacccc
ttcggtctctttcatgtgcaaaacttccaaaatcacattggaaacgcaacgaaagaccag
gtggaakacattgtatcatcagtcacgccagccaagaactacttgaccaagattgtcaag
aggatccacgaaagtctgctgtgcttagactag
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