Salvelinus sp. IW2-2015 (Arctic char): 111954714
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Entry
111954714 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: BOLA class I histocompatibility antigen, alpha chain BL3-7-like
KO
K06751
MHC class I antigen
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
salp04145
Phagosome
salp04218
Cellular senescence
salp04514
Cell adhesion molecules
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111954714
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111954714
04145 Phagosome
111954714
09143 Cell growth and death
04218 Cellular senescence
111954714
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111954714
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111954714
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
111954714
Exosome [BR:
salp04147
]
Exosomal proteins
Proteins found in most exosomes
111954714
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
Antigens
111954714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
ig
Ig_2
TMEM154
EphA2_TM
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
111954714
NCBI-ProteinID:
XP_023990448
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All DBs
Position
LG30:complement(18081404..18187962)
Genome browser
AA seq
364 aa
AA seq
DB search
MKGFILMFLGIVHLHEAFGAIHCLTHFYTASSDIPNFPEFVVVGMVDGVQIVHYDSNSQK
VVPKQDWMKQTDAEFWESEREKFFNSQQSFKVEVHILMQRFNQSGGVHILQYIYGCSLDN
ESEQKEGFGQLRYNGENFLVYDMKTLAWKSLKQQADFMQDKWNHDHSRLVFWRIYFTQTC
IECLKKQVVNGKSILMRTVPPSVSLLQKTLSSPVTCHATGFYPSGVMVVWQKDGQDHHED
VEHGQXLPNDDGTFQKSTHLTVTPEEWKNNKYQCVVQVTGIKEDFIKVLTESEIQTSWGK
TNRGTNDPNTIGSAPIIGVAVALLVVVVVVVGVVIWKKKREKGFVPASSSDTDSENSWKG
AQKT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttttatcctcatgttcctgggaatagtgcaccttcatgaagcatttggtgcg
attcactgcctgacgcatttctacaccgcatcttcggacattcccaacttcccagagttt
gtggttgtggggatggtggatggtgttcagatagttcactatgacagcaacagccagaaa
gtggtgcccaaacaggactggatgaagcagacagacgcagagttctgggagagcgagaga
gagaaattctttaattcccagcagtcattcaaagttgaagttcatattctaatgcagcgt
tttaaccaaagtggaggagtccacattctccagtacatatatggctgctcattggataat
gagtctgaacagaaagagggttttggacagctccgttataatggggagaacttccttgtg
tacgacatgaagacattagcttggaaatctcttaaacaacaagctgatttcatgcaggat
aagtggaaccatgaccacagtagactggtattctggaggatctacttcacccagacctgc
attgagtgtctgaagaagcaggtggtcaatgggaagagcattctgatgaggacagtccct
ccgtcagtgtctctgctccagaagaccctctcctctccagtgacctgccacgctacaggt
ttctaccccagtggagtcatggtggtctggcagaaagatgggcaagatcaccatgaagat
gtggagcatggacagnnactccccaacgatgatggaaccttccagaaaagcacccacctc
acagtgacgcctgaggagtggaagaacaacaagtaccagtgtgtggttcaggtcactggt
atcaaggaggacttcatcaaggttctgactgagtctgagatccagaccagctggggaaag
accaacaggggtacaaatgacccaaacaccattggctccgcccccatcattggagtggct
gtagctctcctggtcgttgttgttgttgttgttggggtcgtcatttggaagaagaagaga
gagaaagggtttgttccagccagctcttccgacactgactctgagaactcatggaaaggt
gcccagaagacttga
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