Salvelinus sp. IW2-2015 (Arctic char): 111954952
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Entry
111954952 CDS
T05762
Name
(RefSeq) ubiquilin-4
KO
K04523
ubiquilin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111954952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111954952
03051 Proteasome [BR:
salp03051
]
111954952
Membrane trafficking [BR:
salp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111954952
Proteasome [BR:
salp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111954952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
YukD
CUE
HOIP-UBA
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
111954952
NCBI-ProteinID:
XP_023830686
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Position
LG30:complement(1486919..1505922)
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AA seq
594 aa
AA seq
DB search
MEDNGGEDPVNNNNNTTVSSEGSIIKVTVKTPKDKEEIAISEDASVTQFKEEISRRFKAK
QDQLVLIFAGKILKDGDSLNQHGIKDGLTVHLVIKTAHKAGDGASSCTSQVGSSSGSSSG
PSSAVHSSTVGSTGGPASAPPQTPNILTGFGDLSSLSSMGMGSANFMELQQQMQSQLMSN
PEMLSQIMENPLVQNMMSNPDLMRQMIVANPQMQQLMERNPEISHMLNNPELMRQTMELA
RNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAARDQFGNNPFSALGGN
SDGGVQPSRTENREPLPNPWGPPSSTTPSEGGGGTGTTGSSTTGSTNPSVSNPLGVNSAS
LGNGMFSSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPDMASQVLMNNPLFAG
NPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALLQIQQGLQTLQTEAPGLMPSLAP
GGLPGGLPGGLVGGLPGGIPTTPLSVGGGVAPENPASSPSAGTNPAQQLMMQQMLQMFAG
GNASSQTPEVQFQQQLEQLGAMGFINREANLQALIATGGDVNAAIERLLGSQPS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaacggcggtgaagatcctgttaataacaacaataatacaacggtatcttct
gagggatctattattaaggttacagtcaaaaccccgaaagataaggaagaaatcgccatc
tcggaagatgcctcggtcactcagtttaaggaggagatctcgcggaggttcaaagccaag
caggatcagttggttctgatctttgcagggaagatcctgaaggacggggactcgctcaac
caacacggcatcaaggacggcctgacagtccacctggtcataaagacggcacacaaggca
ggagatggcgctagttcctgcacctcccaggtgggcagcagtagtggcagctcctcgggc
cccagttctgcagtccactcctccacagtagggtccactggaggccctgcctcggcaccc
ccacagacccccaacatactgaccgggttcggtgacctgtccagtctgagcagcatgggc
atgggctcagctaacttcatggagctgcagcagcaaatgcagagccagctgatgtccaac
ccagagatgctgtctcagatcatggagaaccccctggtgcagaacatgatgtccaaccca
gacctgatgaggcagatgattgtggccaaccctcagatgcagcagctgatggagcgcaac
cccgagatctcccacatgctcaacaaccccgagcttatgagacagaccatggagctggcc
aggaaccctgctatgatgcaggagatgatgcgtaaccaggaccgggcacttagcaacctg
gagagcatcccygggggctacaacgccctgcgaaggatgtacacagacatccaggaaccc
atgttcagcgccgcacgagaccagtttggaaacaaccctttctcagccctggggggcaac
tctgatgggggggtgcagccgtcgaggacagagaaccgggaaccgctgcccaacccatgg
ggcccccccagctccaccaccccctctgagggtggagggggcacgggcaccacaggctcg
tctaccactggcagcaccaaccccagtgtctccaaccctctgggtgtcaactctgccagt
ctgggaaatggcatgttcagcagtccaggcatgcagagtctgatgcagcagatttcagag
aaccctcagctgatgcagaacatgctgtctgctccctacatgcgcagtatgatgcagtct
ctggcccagaacccagacatggcctctcaggtgttgatgaataatcccctgtttgctgga
aatccccaactgcaggaacagttcaggagccagctgcctgtcttcctgcagcagatgcag
aacccagaggcgctctctgtcatgaccaacccccgagccatgcaggctctcctccagata
caacagggcctacagacgctgcagacagaagcaccaggactcatgcccagtttggcaccg
ggtgggctgccaggtggtctaccaggggggctagtaggtggattaccaggtggaataccc
acaacccccctgtccgtaggagggggtgtggctccagagaaccccgcctcttcgccgagc
gctgggacaaaccccgcccagcagctgatgatgcagcagatgctccaaatgttcgcagga
gggaatgcctcgagccagaccccggaggtgcagttccagcagcagctggagcagctgggt
gctatgggcttcatcaaccgagaggccaacctgcaggccctsatcgctackggaggagat
gtcaacgctgccatcgagagactgctgggctctcagccctcataa
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