Salvelinus sp. IW2-2015 (Arctic char): 111955082
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Entry
111955082 CDS
T05762
Name
(RefSeq) heat shock factor protein isoform X1
KO
K09414
heat shock transcription factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111955082
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
111955082
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vert_HS_TF
HSF_DNA-bind
DUF2813
ZapB
DUF4201
DruA
Motif
Other DBs
NCBI-GeneID:
111955082
NCBI-ProteinID:
XP_023830921
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Position
LG30:complement(3950913..3978460)
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AA seq
535 aa
AA seq
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MEFHVGGSVGVVVSGNNVPAFLTKLWTLVEDPDTDPLICWSPNGNSFHVFDQCRFSKEVL
PKYFKHNNMARFVRQLNMYGFRKVVHIEQGGLVKPEKDDTEFQHPYFLRGQEHLLENIKR
KVTNVSNVKHDELKMSSDDVSKILTNVQHIKGKQETIDSQIIAMKHENEALWREVASLRQ
KHAQQQKVVNKLIQFLVTLVQSNRVLGMKRKIPLMLNDSSSAHSLPKFSRQYSLEHLQAS
LQGSPAISASGAPFTSTGLFTAETSLNNGPIISDVTDLAQASPVEVTNEWIEESMSPLVH
IKEEPSSPVLEEVCSAEAVIGGAGVQVDTPLSPITFINSILQESNEPNASPAPTTXTEQK
CLSLACLDNSTQMSEVSRLFPSPSSTLHLRPHPGSELSDHLDSIDNGLENLQTILNAQSI
NFESSPLFEFFSSSLPGSEFDLESLDCIQDLLSSDPPKGAERSDNYTAGKQLVQYTSQPM
LLTDPLTNENGGADLPTLLEGDSYFTQDQDPEEDPTISLLTTDYHTAAPDKPKLS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcacgttggtgggtctgttggggtcgttgtcagtgggaataacgtacctgca
tttctcacaaaactttggactcttgttgaggatcctgacaccgatcctctaatctgctgg
agcccaaatggcaacagcttccatgtmtttgatcagtgccgattttccaaggaggtgctt
cccaagtattttaaacacaataacatggccagrtttgtgcgccagctcaatatgtatggc
ttccgcaaagtagttcacattgagcagggcggcctggtgaagcctgagaaggacgacact
gaattccagcatccctacttcctccgcggacaagagcatctgctggaaaatatcaaacgt
aaagttaccaatgtgtccaatgttaaacatgatgagcttaagatgagctcagacgatgtc
tcgaaaatcctgaccaacgtgcagcacataaagggcaagcaggagaccatagactcccaa
atcatcgcratgaagcatgagaatgaagctctgtggagggaggtggccagcctcagacag
aaacacgcccagcaacagaaagtcgtcaacaagctcatccagttcctagtgaccctggtg
cagtccaacagagtcctggggatgaagagaaagattcccctgatgctgaatgacagcagc
tccgcccactccttgcccaagttcagcaggcagtactctctggaacatcttcaggcctcg
ctgcagggctcgcctgctatctccgcctcgggcgcaccattcaccagtaccggtctcttc
acggcagagacgtctcttaacaacggccccataatctctgacgtcaccgacctggcacag
gccagccctgtggaggtcactaatgagtggatagaggaaagcatgagcccattggtccac
ataaaggaggagccgtccagtcccgtgttggaggaggtgtgttcggccgaggccgtgatc
ggtggggcaggagtccaggtagacacgcccctgtcccccatcaccttcatcaactccatc
ctgcaggagagcaacgagcctaacgcgtcccctgccccaacgaccrctacggagcaaaag
tgtctcagcctcgcctgtctagacaattctacacagatgtcagaggtctctcgcctcttc
cccagcccctcctcgactctacacctcagacctcacccagggagtgagctgagtgaccat
ttggacagcatcgacaatggcctggaaaacctccagactatcctaaacgcgcagtccatc
aatttcgagtcctcacccctctttgaattcttcagttcttccctgcctggttctgaattc
gacctggagagccttgactgtatccaggacttgctttcatcagatccacccaaaggggct
gagagaagtgacaactacacagcagggaagcagctggtccagtacacctcccagccaatg
ctactgactgacccactgaccaatgagaatggcggagcggacctccccactctgctggag
ggggactcgtatttcacccaggaccaggaccctgaagaagaccctaccatctcgctcctc
actaccgactaccacacagcagcaccagacaagcccaaactatcctaa
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