Salvelinus sp. IW2-2015 (Arctic char): 111955922
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Entry
111955922 CDS
T05762
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 1
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111955922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111955922
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111955922
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GFIT
Motif
Pfam:
HLH
Hairy_orange
dCache_2
Motif
Other DBs
NCBI-GeneID:
111955922
NCBI-ProteinID:
XP_023832073
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Position
LG31:22227646..22231492
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AA seq
358 aa
AA seq
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MKRNHDFSSSDSELDENIEVEKESADENGNMSSPLGPMSPXTKTQVNARKRRRGIIEKRR
RDRINNSLTELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKMLHAAGGKGYFDAHALASD
YRGLGFRECLAETARYLSIMEGLDSTDPLRIRLVSHLNSYASQREAHSVSVSGLGHLAWG
SAFGSPPSAHLAHHLLLQQQHHQHQQGATLPLPRSASNSSPSSSSSTPSSSSSSSSSPIE
REPRSSPHGHAPSRLSGATPLSEHSHAQGGPLRVPPSAAPLPPGLNLTVTSTAASAASKL
SPPLSLSSLSTLSAFPFPFSAFPLLSPGTLSPPVHTPSSQASLGKQPYRPWGMEIGAF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaatcacgattttagctcctcggacagcgagctggacgagaacattgaggtt
gagaaggagagtgcagatgaaaatgggaacatgagttctccccttgggccgatgtctcca
kcaacaaaaactcaagtgaatgcgaggaagcgccgtcgaggaatcattgaaaaacgtcgc
cgtgacagaatcaacaacagcctcaccgagctgcgcagactggtccctagcgcgttcgag
aagcagggttcagctaaactggagaaagcagagattctgcagatgacggtggatcatctg
aagatgcttcatgctgctggaggaaaaggttactttgatgcccatgccctggcctcggac
taccggggtctgggtttcagggaatgtctggctgagacggcccgctacctgagcattatg
gaaggcctggacagcactgaccccctgcggatccgcctggtctcccacctgaacagctac
gcctcccagagagaggcccactccgtctctgtgtctggactgggccacctggcatggggc
tcggcttttgggtctcccccctccgcacacctggcccaccacctcctcctccagcagcag
caccatcaacaccagcagggggcgacgttaccgttaccacgcagcgcctccaacagctct
ccgtcatcctcctcttctactccttcttcatcctcttcttcctcctcctcgccgatagag
agagagcctcgctcctcgccccatggccatgctcccagcaggcttagcggtgccaccccc
ctctctgagcacagtcacgcccaggggggtcctctccgtgtcccccccagtgctgccccc
ctccccccagggctgaacctcaccgtgacctccacagccgcctctgcmgcctccaagctc
tcccctcccctctccctgtcctcactctccaccctatcggcgttccccttccccttcagt
gccttccccctgctgtcccccggcaccctcagcccccccgtccacaccccctccagccaa
gccagcctggggaagcagccctaccggccctggggcatggagataggggctttctga
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