Salvelinus sp. IW2-2015 (Arctic char): 111957050
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Entry
111957050 CDS
T05762
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111957050
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111957050
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111957050
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C46: hedgehog family
111957050
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Morphogens
111957050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Hom_end_hint
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
111957050
NCBI-ProteinID:
XP_023833538
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Position
LG32:complement(22603257..22606141)
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AA seq
415 aa
AA seq
DB search
MDVMLILIRIALVGFICLFLASAGLACGPGKGYGKQRHPKKLKPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVNYES
KAHIHCSVKAENSVAAKSGGCFPGSASVLLEDGRSKLVKELEVGDKVLAADIEGNIVSSD
FLMFLDQDPVSRREFYVFETEKPNRKLRLTPAHLVFITSNVTDDDMTAVFASNVKPGQQV
FVVDEAVDHLKAVTVERIYVEEYEGSYAPVTSQGTIIVDHVLASCYAVIEDHKWAHWAFA
PVRLGHALMSFTDLVKKREDIRQRDGIHWYSDILYHIGTLLLDRNSFHPLGMSQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatgcttatactgataagaattgcgctcgtgggcttcatctgcctgtttcta
gcatccgctgggttggcctgtggtccaggcaagggatatggaaaacaaagacatccgaaa
aaactgaagcctttggcttacaagcagttcattcccaacgtggcggagaagacccttggg
gccagtggcaaatacgaagggaagatcacaaggaactctgaaagatttaaagacctgaca
ccaaactacaatcctgacattattttcaaagatgaggaaaacactaatgctgacagactt
atgacacagagatgtaaggacaaactgaactctttggctatttcagtcatgaatcagtgg
ccgggagtgaagctgcgcgtgacagaaggctgggacgaggatggacaccatttcgaagaa
tctttacactatgaaggaagggctgtggatattaccacctctgacagagataagagcaaa
tatggaatgttatcccggctcgcggtggaggcaggattcgactgggtcaattatgaatcc
aaagcccatattcattgctctgtgaaagcagaaaattcagttgctgcaaagtcgggtggc
tgcttccctggatccgcctcagttctcctcgaggatggtcgaagcaagctggtaaaagaa
ctggaggtgggcgacaaggtgttagcagcagacatagaaggaaatattgtgtccagcgat
ttcctcatgttcttggaccaagatccagtgtcaagacgagaattttatgtttttgaaaca
gagaagcccaaccgaaagttaagactgaccccggctcacctggtcttcatcaccagtaac
gttacggatgacgatatgactgcagtgtttgccagtaatgtaaaacctgggcaacaggtg
tttgttgtggacgaggccgtagaccacctgaaggcagttactgtggaaaggatttacgtg
gaagaatacgagggatcttatgccccagtaacctcacaaggaaccatcatagttgaccat
gttttggcgagctgttacgcggtaatcgaggaccacaaatgggcgcactgggcctttgcg
ccagtccggttggggcacgcgttgatgtccttcacagatctcgtcaaaaagcgcgaggac
atacgtcagagagatggaatacactggtactcagacattctataccacatagggacattg
ctgctggacagaaactccttccatcctcttggaatgtcccaaagctga
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