Salvelinus sp. IW2-2015 (Arctic char): 111960878
Help
Entry
111960878 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 4-like
KO
K22991
WD repeat-containing protein 45
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111960878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960878
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
Others
111960878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Motif
Other DBs
NCBI-GeneID:
111960878
NCBI-ProteinID:
XP_023838813
LinkDB
All DBs
Position
LG4q.1:29:complement(28393459..28404628)
Genome browser
AA seq
341 aa
AA seq
DB search
METGVRIYNVEPLMEKGHLDHEQVGSVAQCSMLHRSNLLAVVGGGINPKFSEISVLVWDD
AREGRDPKDKLVLEFTFTKPVLAVHMRHDKIIIVLKNSIYVYSFPDNPVKLFEFDTRDNP
KGLCELCPSLEKQLLVFPGHKCGSLQLVVIHLFHLIVYSMVLTNYVGLSHIPLSYHSPLL
RNLKPREGSSQVFGFSDIQTPATLYWYWEGGREGGTDPATLYCINFSHDSSFLCASSDKG
TVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLASFTVPAECACICAFGKNTSKN
VNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagacaggtgttcggatatacaatgtggagcctcttatggagaagggacaccttgac
catgagcaggtgggaagtgtggcccagtgttccatgctgcatcgctccaacctgctggct
gtagtaggaggtggaatcaaccccaagttctcggagatctctgtgttggtctgggatgat
gctcgggagggaagggaccccaaggacaagttggtgctggagtttaccttcaccaagcct
gttctggcagtacacatgagacacgacaagatcatcattgtgttaaagaacagyatctat
gtctacagtttccctgacaaccctgtgaaactgtttgagtttgacaccagagacaaccct
aaaggactgtgtgaactatgtcccagtctggagaaacagctgctggtcttccctggacat
aagtgtggaagtctgcagcttgtggtaattcatctatttcatttaatagtttattccatg
gtacttactaactatgttggtttatcacacatccccctgtcgtaccactcccctctcctc
cgtaaccttaagccgagagaggggagcagccaggtcttcggttttagcgacatacagacc
cctgctacactctactggtactgggagggagggagggaaggaggaacagaccctgctaca
ctctactgtatcaacttcagtcatgactcttcgttcctgtgtgcctctagtgacaagggc
actgttcacatcttcgctctcaaagacactaaactcaacagacgctctgcattggctcgt
gtggggaaggtgggccctgtgattggtcagtacgtggacagtcagtggtcattggcaagt
ttcaccgtcccggcggagtgtgcctgtatctgtgcatttgggaagaacacttccaaaaat
gtcaactctgtcatcgctatctgtgttgacgggacgttccataagtacgtgttcacccct
gatggcaactgtaaccgggaagcctttgacgtttacctggacatctgtgatgacgatgac
ttctga
DBGET
integrated database retrieval system
